Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0572 ATGGCAGCAACCCCACCACAGGATCCGGATCGTACAACCGAAGAGGTAGCAACTGAACCAGACAAAATGAAGGATCAGCTTCATTCATCAATACAGGGTAGGCCAATTTCTTCTAATGCCTCTCAGGATGCTACCATGGCTCATTCAGGGGAGACAAGTCAATCAGGATCGTTTGTTTCGGGGGGAGCCTGTCCTCTATACCCACCTAATGTCTATGCCCCGCAGGCCCAAGCTTTCTTTTACCCAGGTTTTGAAAATGCCAACGGAGAATGGGATGATTATCCTTCATATATCAATTCTGAAGCATTGGAAATTGGATCGCCTGGTCTCTACAATGATAATCCATCTCTTCTTTTCCATTCTGGATATGGCTTCAACCCACAAATGCCTTATGGACCATATTCTCCTGTGACAACACCTATGCCTTCTGTAGGTGGAGATCCACAATTATACTCCCCACAGCAATTTCCATACTCTGGGCCACCTTATTACCATCAGCTAGTTTCCCCTAGCTTACCATATATTTCTTCGCCAGCTCCTGCTTCCCAGATGGAGCTCACTAACTTTGTGGGTGTTGATCGACCAGGTGATAGCATGGTTTTGGGACCAAGACCTGGCTATCCCTCAATGGGATCCTTTGGTAGAGGTAGTTTTCCTGGAGCAATTGGTTCTTTTGGCTTTCATGATTCCCAACAAGGATTTGATGGATCAAGATCTGCGGGAAATGGAATCTGGTCAGATTGCTCAAAACCCTCAGAAAGGCATATGTCCATGATGCCCCTATCACCAGCAGTATCTCCACAGCCACTTGGGTCACCTGGGTCATTTGGGCAGAGTGTTGGACTGGCTTCTCATCAACAACCACCATTGTATGGGTTTGGATCCCGTTTAAACTCCTATGGTAGAGACTATGTCCCCAACCAGGGATCTAGATTTGGTGGCTCTGCTATTTCCAGTCTTGGTGTAAATGACAGGAACTGGCTTTCTCTTGAAAATAGCAGACGGCGTGACAGGGAAATGTCTTCATTTTGCGGTTGTGATGGTACTCATGATGTACTCAGCGAGCAGAATAGAGGTCCTAGGGCCTCAAAACTTAAGAATCACTTGTTAGCTGAAAATGTTTCTGTTGATAGTAGTAAAAAGAGTGCTTCTACTACCAAGCTCCACAATGAATCATTTAACCGGACAGAATTTATCACAGTTTACAAGGATGCCAAATTGTTTGTCATCAAATCTTATAGTGAAGATAATGTCCACAAGAGCATCAAATATGGGGTCTGGGCCAGTACACCAAATGGAAATAGAAAGTTAGACGCTGCATATCGCCAAGCAAAGGAGAAGCAAGATGCCTGCCCTGTATTTCTCTTATTTTCGGTAAATGCTAGTGCTCAGTTCTGTGGGGTGGCTGAAATGGTTGGGCCTGTTGATTTTGACAAGAGTGTGGATTACTGGCAACAAGATAAGTGGAGCGGACAATTTCCCCTCAAGTGGCACATAGTTAAAGATGTTCCTAACAGTCAGTTTCGACACATTGTCCTTGAAAATAATGATAACAAGCCTGTGACCAACAGTCGAGATACTCAGGAGGTGAAATTGCAACAGGGGATTGAAATGTTGACCATTTTCAAGAATTATGACGCCGAAACGTCTATCCTTGATGACTTTGATTACTATGAAGATCGGCAAAAGGCTATGCAAGAACGAAAGGCAAGGCAGCAAGCCAGCCTAATGGCTCTACCAATGGGAGAAGGTGAACGCAAGAGTTCTGCTCCTGCTAACATAAATGGTGATTTTATGAAGCAGATGACTAAGAGCTTTGCACAAGTTGTTCGCTTAGACGACAATAGTACTGAAACAACTGTTGCCGATAGGGGTAGTCTAACCACTGATGCCTCCAATGGTACTGTTGTTAAGCTGGAAGATGGTATTCCTGAAATTGCTACTGGTGTCATTAAAGTGATTGGAGTTTATGGTGTTTCTAAGTGGAAAAAGACAAATTTCAGAGATAGCCAGTCTGAAGGAGAAAGAATCATAGAGATTACGATCAGTGAACAAAAATTTAGAATGGTGATGATCGTTAACATCATGGTAACGACGGTGATGAGTGTATTCAAGGCAACATCGGAAGAACTTTCCCGGGAAAACCTCTATGGTGGTTGGGCAACGCTTATTGCGCTGTTTATTTTATTGATTCTTTGGCAGTATAGAAGGTTTTTCTTGGCCCATTCTTCTCCATACAAATCCGTTTTGGTTTCAGATTCTTTCCCCAGATCGAATTCCAAGTTCAGAATATCAGAATTTGTGACAGATGCAGATTTGAAGTTTTTACTGGAAAACTTGGATGAGAAGTTCCATGAAAGTGATAAGTGGGAAACTGTCACAGATAAAAGTAACAAGAATCTGTCCTACTCTGCAAAATGCTGCAAGCCAAAGGATGGTCCTCTGAAGTACTTGAGCATGACTACATTTAATGAGGTTTCATCTGAGGTGCTAAGAGACTTCTATCTGGACAATGATTACAGAAAGCAGTGGGATAAGACTGTGGTTGAGCATGAGCAACTGCAGGTGGATAAATCTAGTGGTGTTGAAGTTGGTCGTACAATAAAAAAGTTTCCCCTTTTGAGCCCTAGAGAATATGTGCTGGCTTGGAAATTGTGGGAGGGAAGGGATAAAACATTCTACTGTTTTATAAAGGAATGCCAGCATCCTTTGGCACCATATCACCAAAAATATGTACGTGTTAAATTTTTCAGATCTGGGTGGCGAATTAGAAAAGTACCTGGTAGAAATGCCTGTGAAATCGTGATGTTTCATCAAGAAGATGCGGGTTTGAATAAGGAGATGGCAAAGCTGGCTTTTGCCAGGGGCATATGGAGTTATGTGTGCAAGATGGATAATGCACTCCGTAGGTATTCTAGTCCATCAAGTTCAGTTACCACTTCAGCCAACTTAATGCAGAAGGTACCAACTTCCTTAGACACAATTAATAGCAATGGGTCACATCCTACTTTACTCCATGAACATGTCTCCAACGAGTCTCGTAAGAAGACATTATTTAAAAGGCCATCAAGAAAGTTCATAGCCAATAGTTTACTGCTTGTAGGGGGTGCAATCTGCCTATCTCGAGGTCACTCTAGTCTTGGTGCAAAAGTAGCCTTGGCTTACATGTTAACAAAACTCGGCAAGCACGGCAAGAACAGTGCCGAATCAAACCCAAACGAGCAAAAATCAAGGTAG 3237 0.4297 MAATPPQDPDRTTEEVATEPDKMKDQLHSSIQGRPISSNASQDATMAHSGETSQSGSFVSGGACPLYPPNVYAPQAQAFFYPGFENANGEWDDYPSYINSEALEIGSPGLYNDNPSLLFHSGYGFNPQMPYGPYSPVTTPMPSVGGDPQLYSPQQFPYSGPPYYHQLVSPSLPYISSPAPASQMELTNFVGVDRPGDSMVLGPRPGYPSMGSFGRGSFPGAIGSFGFHDSQQGFDGSRSAGNGIWSDCSKPSERHMSMMPLSPAVSPQPLGSPGSFGQSVGLASHQQPPLYGFGSRLNSYGRDYVPNQGSRFGGSAISSLGVNDRNWLSLENSRRRDREMSSFCGCDGTHDVLSEQNRGPRASKLKNHLLAENVSVDSSKKSASTTKLHNESFNRTEFITVYKDAKLFVIKSYSEDNVHKSIKYGVWASTPNGNRKLDAAYRQAKEKQDACPVFLLFSVNASAQFCGVAEMVGPVDFDKSVDYWQQDKWSGQFPLKWHIVKDVPNSQFRHIVLENNDNKPVTNSRDTQEVKLQQGIEMLTIFKNYDAETSILDDFDYYEDRQKAMQERKARQQASLMALPMGEGERKSSAPANINGDFMKQMTKSFAQVVRLDDNSTETTVADRGSLTTDASNGTVVKLEDGIPEIATGVIKVIGVYGVSKWKKTNFRDSQSEGERIIEITISEQKFRMVMIVNIMVTTVMSVFKATSEELSRENLYGGWATLIALFILLILWQYRRFFLAHSSPYKSVLVSDSFPRSNSKFRISEFVTDADLKFLLENLDEKFHESDKWETVTDKSNKNLSYSAKCCKPKDGPLKYLSMTTFNEVSSEVLRDFYLDNDYRKQWDKTVVEHEQLQVDKSSGVEVGRTIKKFPLLSPREYVLAWKLWEGRDKTFYCFIKECQHPLAPYHQKYVRVKFFRSGWRIRKVPGRNACEIVMFHQEDAGLNKEMAKLAFARGIWSYVCKMDNALRRYSSPSSSVTTSANLMQKVPTSLDTINSNGSHPTLLHEHVSNESRKKTLFKRPSRKFIANSLLLVGGAICLSRGHSSLGAKVALAYMLTKLGKHGKNSAESNPNEQKSR 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0572 1078 FunFam StAR-related lipid transfer protein 7, mitochondrial 763 973 - -
Lele40g0572 1078 Pfam YT521-B-like domain 406 543 IPR007275 GO:0003723
Lele40g0572 1078 SUPERFAMILY Bet v1-like 778 972 - -
Lele40g0572 1078 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 90 616 IPR045168 -
Lele40g0572 1078 ProSiteProfiles YTH domain profile. 405 542 IPR007275 GO:0003723
Lele40g0572 1078 FunFam YTH domain family 1, isoform CRA_a 384 557 - -
Lele40g0572 1078 MobiDBLite consensus disorder prediction 12 28 - -
Lele40g0572 1078 CDD START_STARD2_7-like 768 971 - -
Lele40g0572 1078 Gene3D ph1033 like domains 381 557 - -
Lele40g0572 1078 Pfam START domain 786 940 IPR002913 GO:0008289
Lele40g0572 1078 ProSiteProfiles START domain profile. 786 973 IPR002913 GO:0008289
Lele40g0572 1078 Gene3D - 763 973 IPR023393 -
Lele40g0572 1078 MobiDBLite consensus disorder prediction 256 283 - -
Lele40g0572 1078 MobiDBLite consensus disorder prediction 30 58 - -
Lele40g0572 1078 MobiDBLite consensus disorder prediction 268 283 - -
Lele40g0572 1078 MobiDBLite consensus disorder prediction 1 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0572 Lele-ChrLele40 4921309 4941521 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele40g0572 40 4921309 4941521 Lele40g0572 40 4921309 4941521 ECH
Lele37g0646 37 5603615 5605675 Lele40g0572 40 4921309 4941521 hybridization
Lele38g0603 38 5096445 5103293 Lele40g0572 40 4921309 4941521 hybridization