Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0512 ATGGCTGCTTCCGTTGCTGGTAGTAATAGGTCATGTTCTTCCTGGATTAAATTCAAGGACAGTGCAAAGAAGCAGAGAAGGGTGAACAGAGTTAAGATTTCTTGTTCTTCTTCTTCTGTAATCGATCCTTACAAGACCTTAAGAATCCAGCCTGGCTCATCCGAATCTGAGGTTAAGAAAGCTTTTAGACAGCTTGCTTTGCAGTTTCATCCAGACGTTTGCAGAGGAAGCAATTGTAGGGTACAGTTTCACCAAATCAATGAGGCTTATGATATAGTGATGGATAATTTGAGAGGAGGAGCAAATGGAAGTGAAATGTATGGTAGTGGTGATGAAGATGGAGGGAATGATGAATCAATAAGAGGAATGAATGATCCAGATTGGGACTTGTGGGAAGAGTGGATGGGTTGGGAAGGAGCAGGAATCCGCGACTACTCATCTCATATCAATCCTTACATTTGA 462 0.4199 MAASVAGSNRSCSSWIKFKDSAKKQRRVNRVKISCSSSSVIDPYKTLRIQPGSSESEVKKAFRQLALQFHPDVCRGSNCRVQFHQINEAYDIVMDNLRGGANGSEMYGSGDEDGGNDESIRGMNDPDWDLWEEWMGWEGAGIRDYSSHINPYI 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0512 153 CDD DnaJ 42 95 IPR001623 -
Lele40g0512 153 ProSiteProfiles dnaJ domain profile. 42 108 IPR001623 -
Lele40g0512 153 SUPERFAMILY Chaperone J-domain 38 102 IPR036869 -
Lele40g0512 153 Gene3D DnaJ domain 14 100 IPR036869 -
Lele40g0512 153 Pfam DnaJ domain 42 96 IPR001623 -
Lele40g0512 153 FunFam chaperone protein dnaJ 8, chloroplastic 16 103 - -
Lele40g0512 153 PRINTS DnaJ domain signature 78 98 IPR001623 -
Lele40g0512 153 PRINTS DnaJ domain signature 44 62 IPR001623 -
Lele40g0512 153 PRINTS DnaJ domain signature 62 77 IPR001623 -
Lele40g0512 153 PANTHER CO-CHAPERONE PROTEIN DJLA 26 151 - -
Lele40g0512 153 SMART dnaj_3 41 98 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0512 Lele-ChrLele40 4324709 4325957 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0574 37 4736841 4738189 Lele40g0512 40 4324709 4325957 hybridization