Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0445 ATGTCTGCTGCAGTGTGTGGGAGCAAGAGATCTTTCTTTGAAGACCTTCCTCCATCACCTCCAGTATCCAAGAAGCTTCGTTGCTCATCCTCAAGTTCGCCTGTTCGTTTATCGGTTCTGAGTCTCATCGATCAGCTTCGGGCTGTATTTCCTCACATGGACGACCAGGTCCTTGAGAGGGCACTCCAAGAATGTGGCAATGATATTGATGCTGCAATTAAGAGCCTGCATGAACTTTGCTTGGGATCTGCGAATGAGAATTCTGCCATTGCTGAAGAATCAGAAGTTAATGTGGAGACAGGTAGAGTGAAAGGTGATTTTGATGCTTCTGCTTCTGAGGGTAAGACAGCTTTGAACAAACTTCCTGCCGATGGAGCAGAGTGGATTGACCTTTTTGTGAGAGAAATGGCTGGTGCTACTAGCTTTGACGATGCTAAAGCCCGTGCTGTTAGAATTCTGGAGGCTCTAGAAAAATCAATCTATGAACGTACTCTTGTCGAAGCAACTCATGTTAATCAAAAGGAAAATTTGGTGCTGAAGGAACAAATTGGAGGGCTGATTAAGGAGAATAATATTCTTAAACAAGCAGTAAAAATCCAACATGAACGACTTGCTGATTATGATAACAAGGTTCTAGAGTGTCAGCATTTGAAGCAGGCGTTGTCTCATTGCCAGGAGCAAGTGAGATCTCTTGAGGTGAAAAACTATACCCTGATAATGCATTTGCAGCAGGCTCAACAGTGCAATGCCTTTCCTGGGCGTTTCCCTCCTGATGTTTGCTAA 783 0.4419 MSAAVCGSKRSFFEDLPPSPPVSKKLRCSSSSSPVRLSVLSLIDQLRAVFPHMDDQVLERALQECGNDIDAAIKSLHELCLGSANENSAIAEESEVNVETGRVKGDFDASASEGKTALNKLPADGAEWIDLFVREMAGATSFDDAKARAVRILEALEKSIYERTLVEATHVNQKENLVLKEQIGGLIKENNILKQAVKIQHERLADYDNKVLECQHLKQALSHCQEQVRSLEVKNYTLIMHLQQAQQCNAFPGRFPPDVC 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0445 260 SUPERFAMILY UBA-like 41 84 IPR009060 GO:0005515
Lele40g0445 260 Pfam CUE domain 42 76 IPR003892 GO:0043130
Lele40g0445 260 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 259 - -
Lele40g0445 260 ProSiteProfiles CUE domain profile. 38 84 IPR003892 GO:0043130
Lele40g0445 260 Coils Coil 214 234 - -
Lele40g0445 260 CDD CUE 41 76 - -
Lele40g0445 260 Gene3D - 29 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0445 Lele-ChrLele40 3689948 3694207 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele40g0445 40 3689948 3694207 Lele40g0445 40 3689948 3694207 ECH
Lele37g0505 37 4115955 4120908 Lele40g0445 40 3689948 3694207 hybridization
Lele38g0474 38 3818577 3822886 Lele40g0445 40 3689948 3694207 hybridization