Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0435 ATGAATGGGAGCAGTGGTTGTCTTGGATGCTATCAAAAGCCCACGGTTATTAGCACGGTGGAAATGCCATCAAAAGGGTTGGCACTGCAAGGTAAGGCTGTGAAGAAATTCAGTACATCAGAGGATTTCTGGACCACAAGCACACATGACATGGACAATAGTGCTGTTCTGTCACAAGGAAGCATCTCATCAACAAGTGCAACAAACCAAGTGCTAGATCCTCATGGCGCTTCTAGCAAAATTAATAATCCCGCTGAATTTGTAAATCATGGTCATATTCTTTGGACTCAGACTCGGCAACGTTGGATAAGAAATAATAGATCTCACAATCAGAACCGAACTAAACAGCAACTACAACCTAAATTAAGTTGGAATGCAACATATGAAAGTTTACTTGGGAGCAACAAACCATTCTCTCAGCCAATCCCTCTTTCTGAAATGGTAGATTTTCTGGTGGACGTCTGGGAACAAGAGGGCCTTTATGACTGA 489 0.4233 MNGSSGCLGCYQKPTVISTVEMPSKGLALQGKAVKKFSTSEDFWTTSTHDMDNSAVLSQGSISSTSATNQVLDPHGASSKINNPAEFVNHGHILWTQTRQRWIRNNRSHNQNRTKQQLQPKLSWNATYESLLGSNKPFSQPIPLSEMVDFLVDVWEQEGLYD 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0435 162 Pfam Protein of unknown function (DUF4050) 121 162 IPR025124 -
Lele40g0435 162 Pfam Protein of unknown function (DUF4050) 47 117 IPR025124 -
Lele40g0435 162 PANTHER OS07G0479600 PROTEIN 5 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0435 Lele-ChrLele40 3590158 3592528 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele40g0435 40 3590158 3592528 Lele40g0435 40 3590158 3592528 ECH
Lele38g0463 38 3746854 3749224 Lele40g0435 40 3590158 3592528 hybridization