Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0363 ATGAACGCCCTCTATCAGTCTCTCAATCAAGGTGGCGTTTCCATGCTGGAAAGTCCCACTGGTACTGGGAAGACTATGAGTGTTATTTGTAGCGCTTTGCAATGGGTGCTTGATCGGAGGCAACAGCAGAAATCAGAGGAAGCAGGGCGTGATAAGAATCAGGAAAATCATGGCGGAGGTTCAGATGATGAACCTGATTGGATGAGAGACTTTGTTGTGGACAAAGAAAGGCAAGTCCAATCTGAAAGAAGAAGCAAGAAGAAGTATGGGTCTAGATTAGATAAGCCCGATAAGAAGAATAACCGGGAAGTTTGTAAAGAGGTACTAAAGCTTGGAAACTCCACACGTATAAATGAACGATGCTTGGAACTCCAGAAGAAAAAGAAAAATGAACCAGCAAAAATTAAGGAGGCGTACGGAGAACCATTGCTTAGGAAGCATAGACTGCAGAGAGAATTCAGGAATGAGGTATCTCAGAGAGGGGCCTTGGATATTGAAGATCTTGCTAACTTGGGAAGAAATTTGGGAACTTGTCCTTATTATGGTTCTAGAAGCATGGTTTGGGGAGCTGATCCTGTGGTTCTACCGTACCAGTCTCTTCTGTCAAAGTCATCTCGTGAAGCACTTGGTTTGAATTTGAAATCCAATGTTGTCATTATAGATGAAGCTCATAATTTAGCTGATTCACTCATTATAATGTATGACTCCAGAATTACTTTAGGACAGTTACGGAGAAAAGGTAGCCAACTTGGAGAACATTATGAAGAAGGAAGCACGCAGTCTGCGTTCCAGGCTTTAGCGGACATACTGCTATCGCTGACAAACAATGACAATGATGGAAGGATAATCATTTCAAGGTCTAGAACAGTGGGCCCCAGGAAACAAGGAGGATATATTAAATATGTTATGCTCAGTGGCGAGAAGATATTTTCTGAGATTGTGGACCAAGCACATGCTGTTCTATTAGTAGGAGGAACTCTACAACCTATCGAAGAAACAAGAGAGCGACTCTTTCCGTGGTTATCACCAAACCAGTTGCATTTCTTTTCAAGCGGTCATATTGTCTCTCCACAGAGTATCATGCCAATTGCAGTTTCCCGTGGCCCTTCTGGGCGCTCCTTTGATTTTAGTTACAGCTCAAGGAGCTCACCTGATACTGTGAGTTCTTTTAATGGTTGTGATTATAGCAGTTGGCTGATGGATAGCGTTCTATGTGAGTTGGTATTCTGCACTTTACTTTCTGAAATATTGATTATGATGTATTTGTCTTTACAGATGATGGAGCTAGGTCTTCTCCTCTGTAATTTGGTGACCATAGTTCCTGAAGGAATTGTTGTTTTCTTCTCATCTTTTTATTACGAAGAAAAAGTCTACGAAGCCTGGGAATCTTCTGGCATCCTGGATAGAATTACATAG 1416 0.4181 MNALYQSLNQGGVSMLESPTGTGKTMSVICSALQWVLDRRQQQKSEEAGRDKNQENHGGGSDDEPDWMRDFVVDKERQVQSERRSKKKYGSRLDKPDKKNNREVCKEVLKLGNSTRINERCLELQKKKKNEPAKIKEAYGEPLLRKHRLQREFRNEVSQRGALDIEDLANLGRNLGTCPYYGSRSMVWGADPVVLPYQSLLSKSSREALGLNLKSNVVIIDEAHNLADSLIIMYDSRITLGQLRRKGSQLGEHYEEGSTQSAFQALADILLSLTNNDNDGRIIISRSRTVGPRKQGGYIKYVMLSGEKIFSEIVDQAHAVLLVGGTLQPIEETRERLFPWLSPNQLHFFSSGHIVSPQSIMPIAVSRGPSGRSFDFSYSSRSSPDTVSSFNGCDYSSWLMDSVLCELVFCTLLSEILIMMYLSLQMMELGLLLCNLVTIVPEGIVVFFSSFYYEEKVYEAWESSGILDRIT 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0363 471 Gene3D - 74 278 IPR027417 -
Lele40g0363 471 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 238 IPR027417 -
Lele40g0363 471 MobiDBLite consensus disorder prediction 40 98 - -
Lele40g0363 471 Pfam DEAD_2 104 242 IPR010614 GO:0003677|GO:0003678|GO:0005524
Lele40g0363 471 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-2 domain profile. 1 269 IPR014013 GO:0005524
Lele40g0363 471 Gene3D - 422 470 IPR027417 -
Lele40g0363 471 Gene3D - 1 56 IPR027417 -
Lele40g0363 471 PANTHER DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER 259 389 IPR045028 -
Lele40g0363 471 SMART deadxpd 1 276 IPR006554 GO:0003678|GO:0016818
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0363 Lele-ChrLele40 2977024 2980145 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele40g0363 40 2977024 2980145 Lele40g0363 40 2977024 2980145 ECH