Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0345 ATGGAAGACTCAAAAGCTGAGCAAAGACTGGAGAAACGGATAAGCAGCCTGTCAAAGGGACTCGTAGGTCATGAGGCGGAGGCCGACGCTACAAAGGGCGTCGAACTGGTGAAGCTTCAAAAAGGTTTTGTGCTCTGCTATTTCGTCGTTCACGATGGGGTATTAGATGAAAGAGGGAAATGGCATGAAGGAGCAATGATGACTTTGATGGACGCCGTCGGCAGCTGGGCGGCCTTCTCCTTTACATCACTTGAGCAGATCACTGTTTATCTCTCTGTCTCTTTCTACTCTAAGCCCAATCTCCAGGAAGTGGTGGAAGTAGAAGGGAAGGCGACGGGGGAGAAGGGGAGGATGACGTCAGTGACGGTGGAGGTGAGGACCAAAAGCAATGGACAAATTGTGGCCTTAGGCATCATGTGGATGGCAGCCCCTTCTCATCAAATAAACAAACCACCCTCTTCCAAACTTTAA 471 0.4989 MEDSKAEQRLEKRISSLSKGLVGHEAEADATKGVELVKLQKGFVLCYFVVHDGVLDERGKWHEGAMMTLMDAVGSWAAFSFTSLEQITVYLSVSFYSKPNLQEVVEVEGKATGEKGRMTSVTVEVRTKSNGQIVALGIMWMAAPSHQINKPPSSKL 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0345 156 PANTHER THIOESTERASE SUPERFAMILY MEMBER-RELATED 26 140 IPR039298 GO:0047617
Lele40g0345 156 Gene3D Hotdog Thioesterase 9 148 - -
Lele40g0345 156 CDD PaaI_thioesterase 33 142 - -
Lele40g0345 156 Pfam Thioesterase superfamily 59 132 IPR006683 -
Lele40g0345 156 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 30 140 IPR029069 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0345 Lele-ChrLele40 2846685 2847416 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele40g0345 40 2846685 2847416 Lele40g0345 40 2846685 2847416 ECH
Lele37g0390 37 3252268 3252965 Lele40g0345 40 2846685 2847416 hybridization
Lele38g0368 38 2988340 2990200 Lele40g0345 40 2846685 2847416 hybridization