Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0317 ATGTCAGCCTGTTCAGATTATCGGGTCGCGTTGCTGTATTATGAACATGTAAATCATAGGGCAGTGTGCATCAGACTATATTTGTGCCAACTTCATTGTGGGACATCAACTATTTTTGCCTTATCTGGAGATATACCTGATCGCTCGTTTGATGCTGTTGTAGTGGAGCCAACTCCACTTAATCAAGAGGCAAATGATCAAGAAAATGGATTTATTTCTTCGCCGTTTTTTTCTAAAAGAGAAAGCTCCATGCTTGTTATGACACCATGCTTAAAAATGTCACCCCCTAGATCTTGTGTTTTGCTTGAACCCATATCTGAAATTTGTCATCCAGGCAAAGACAATGACAAGGTACGCAAATCTACTCCATTTCCTGTTGGGATTCATTACAGCGATTCAGAGACTTCTGATTTTTCTGGTAATGATGCTTCAAAAGATCCGGCGTTGAAGTATCTAGAGCTATTAGGGATACAACACATTTCTAAATCTGAAGTTGAAAAGAAAACGACAGAAGCATCCCCAGATTGGGTTATGTCGCCTCCTAAAACTTGTGTTTTGCTGGAGCCACCTGATGATGAGAAGCCGTTTGATTTGGAAAAGGCTGATAAAGGTTTACAGACGACAGATGCTGTTATTGTTAATCAAGAAGCTAACAAACTGAAAGACAATGTTTTCGAAGACCATAATAAAACCAGTGTACCTTGTAACAAAGAACATTTTGGTGGCAACTTATCCCATATGGAGAGCACTATGTGGCTTGAGCCTGAAAGCTCGTTTAGAGCTGGGAAATGCCCTGGTGAGAATACACTGAAGAAAGAATTGTGGACAAGATTTGAAGCAGCATCTGCCAAGGGGCTTCCAAGTAAAACCCCCTCAACTTTGTTATTGACTGGCCTTTACAGGTTGATTATTCTGCCTCTAGCATCTTACTGCTTTGTACCCTTCCCGCCGCTCCCAACGAGTACAAAAGCTCTCTCTTCACTTCATCATCTCTGTAAAATCCCTTCAAAATCATTTCTTCCTGTCAATTCTGAAACCCTAAGTTATCTGTGTTCGTTGTCAATGGCGAAGCTTGATCAGCTGACTCGGCACATTGAGTCCTATGTCGACTCGTCTGCTACTCCCGCTCAGCAGGTTGTAAGTGTGGACGCAATTGGCAATCTTGTAAAGAATAATGCTTTAACTCTGGAAGCACTGGTTAGAGAATTGGAGATGTATTTGACCACAACAGACGACATCATTCGTGCAAGAGGCATTCACCTTCTAGCAGAGGTGCTTACACGCATTGAATCAAAACCTCTTGACAATGCTACTGTTCATAGCTTGATAGCTTTCTTCAAGGACAGATTGGGAGATTGGAGAGCGCTGCAAGGTGCACTTGTTGGTTGTTTGGCAATGATAAGGAGAAAAAATAATTTGGGTGTTGTAACTGATAGTGATGCCAAAGCTGTTGCTCAATCTTTTTTAGAGAATCTGCCAGTTCAATCTTTAGGACAACATGACAGGAAGCTTTGCTTTGAACTTCTTAATAGCCTGCTGGAGCTATACTCTGATGCAGTTTCTTCAGTGGGAGAAAATCTTGTTTATGGCATTTGTGAAGCTATGGATGCTGAAAAGGATCCAGAATGTTTGATGCTTGCTTTTCATTGTGTTGAGAGTTTGGCACGATTATATCCGGATCCTTCTGGTGTACTTGCAAATTTTGCAAGAGATATTTTTGAGATTTTGGAATCTTACTTTCCCATTCACTTTACTCATCCAAGGGGTGGGCATATTGATGTCCAAAGAGATGAACTATCAAGGGCTCTGATGTCTGCATTCTCTTCCACGCCCGTTTTGGAACCATTTGTCATTCCTTTGCTTCTCGAGAAACTTTCTTCTTCCCTACTTTCGGCAAAGATTGATTCCTTGAAGTATCTCAAGGCTTGCTCCTCCAAGTATGGAGCAGAGAGAATGGCAAATCATGCTAGGGCCATCTGGTCTTCATTAAAAGATGCAATATCTACGTATTTGGAAGAGCCAGTTTTTTCTTTTACTTCAGAACCTTTAGTTGGTGTTAACTTTCAGAAGAATGAAATTGTGACAGAGGCTCTTTCCCTTCTTCAATTGCTTATCAAGCAAAATAGTGGTTTGTTAGTGAGCTTGATCATTGACGATGGAGATGTGAACATGGTTTTTGACTCCATTTCATGTCATGAGAAATACAATGATATTCCTGTTCAAGAAAAGCAAAAAATACATGTTATTGGTCGTATTCTCTATGTTACTGCCAAGACTTCCTTTTCCTCTTGTAATCTTGTGTTTCAGAGTCTTTTCTCTGAAATGATGGATGCTTTGGGATTTCCTACAAAAGAAATCAATAGTTTGCCAATTGATAATATGTTGCCCCCTACAGGAGTTAAGTTTGGATTCCTTTATCTCTGCATCGAACTCCTTTCGGGTTGCAGGGATTTGATCGTGTTGTCTGAGGAACCTGGGCTGAATTGGGATTTTGAGCATGAGACATTCTGCACCATTCTTAATAATTTTTCAATTTCATTATTCAATGCCTTTGGTTCTGCCTTATCATTTGGTGCTGATAATCATATTCTTGATCCAGATATTTATATTGGAGTGAAGGGATTGCAGATATTGGCCATATTTCCAGGAGATACTTTTCCAATTACGAAACTTCTATTTGAAAATATGTTGAGGAAATTTATGTCAGTTATAACAGAGGATTTCAACAAAACACTATTATGGGAGGAAGCATTGAAAGCATTGGTTCATATTGGCTCATATATTCATAACTTTCATGAGTCTGAAAAGGCTAAGAGCTATAGGAGTTTTGTTGTAGAAAAAATTGTCAAACTGCTGTCTCTTGAGAATTCTACTATGCCTTTTCCTCTCAAACTGGAAGCATTATCTGACATAGGCATGACTGGAATGATGCATATGCAGAAAGTTCTTCAGGAGTTTGAAGGGGCTGTATTTGCTAATCTATCTATGATTTTTGTCCATGGGAATTTAAGGTCTTCTGAAACTGTTCAGCTTCTTGAGTGTTGCTCAGACAAGTTGCTTCCATGGATCCATGAAAATGAATGTTCTGAGGAATCTGTGGTGCAATTTGCTGTGGAAATTTGGAGTCACATAGGAATGTGCATGGGCTTTAGTGTCCCATTTGAGGAAAAGGGACTTCTGGGTGCAATTATGAAAGTGATGAAACTTGCTGTTGGCCATTGCTCTGTGGAAAGCCAGAATATTATAATTAAAAAAGCATACGACATACTTTCATCACACACTAGTTTTCAGTTTCAGGAACTGGAAGGATCACCTCTAACTCCTGGACAATATGATGTTTCTGATCGAGATAAATGGGTGCTATCAATATTTGCATCAGCAGTTATTGCAGTTCGCCCCCAAACATGCATTCCAAATGAAAGAATAGTTTTGCATCTATTTATAATAACCCTCCTCAGGGGTGTTGTTCCAGTTGCTCAGGCCTTGGGTTCTATGATTAACAAAATGGTTTCAAAATCTGAAGTTACTGAGACATCCAGTGATCTTTCCTTGGAAGAAGCTCTTGATATTATATTCAACACAAAAATAGTTGGTAAGAAATATAGGCAAATGAATCAAGGAAATGATGTGGTTCTGACTGATTTATGTCTTGGAGTTGGAACTGATAGATCGCTTCAAACCAATGCCCTTTGTGGACTCTCGTGGCTTGGAAAAGGTTTGCTTCTACGTGGTCATGAAAAGATTAAAGATGTCACTATGATTCTTTTGAAGTGTTTATCATTCGGCACAAAGAGTGCCTTGCCTTTGATCCAAGATTCACAAGAAGAAATTCACATGAAGAATTTGGATCCTTTAGTAATGAAATGTGCTGCTGATGCATTTCATATTCTTATGAGTGATTCTGAAGATTGTTTAACCAGAAAGTTTCATGTCAGAATGCGGCCACTCTATAAGCAGCGTTTTTTCTCTTCCTTGATGCCTATATATCTGCAGTTGATCCCAAAATCTGATTCTTCAATCTCCAGGTCTGTGTTATATCGAGCTTTTGCACATATCATATCTGATACTCCACTAATTGTAGTATTGAGTGAAGCCAAAAAGCTTATACCAGTTATCCTGGATTGTTTGTCCATCTTGACAGAGGATATTCAAGATAAAGATATGTTGTATGGTCTGCTGCTTGTCTTATCTGGGATCTTAACTGAGAAAAATGGGCATGAAGCTGTTGCTGAGAATATACATATTATCATCAATGGCCTGATTAGGCTTGTAGAGTACCCTCATAAATCGCTTGTCAGAGAGACAGCTATTCAATGTCTTGTGGCCATGTCCGAGATGCCCTACGCCCGGATCTATCCTATGAGAAGACAGGTACTAAGTGCAATATCAAGGGCTCTTGATGATAAAAAGAGAGCTGTTCGTCATGAAGCTGTCAAATGCCGCCAAGCATGGTTGACATCCCATTGGCAAAGTCTACTTCCCAGAATCACTCAACGCCAATTAGCATTTCTCATCACTGGGCACAATGAATTATCAGTTTACAAGACTTCATCCGCAATTCATAATCTGGATCACGTCCTCCATTAA 4587 0.3959 MSACSDYRVALLYYEHVNHRAVCIRLYLCQLHCGTSTIFALSGDIPDRSFDAVVVEPTPLNQEANDQENGFISSPFFSKRESSMLVMTPCLKMSPPRSCVLLEPISEICHPGKDNDKVRKSTPFPVGIHYSDSETSDFSGNDASKDPALKYLELLGIQHISKSEVEKKTTEASPDWVMSPPKTCVLLEPPDDEKPFDLEKADKGLQTTDAVIVNQEANKLKDNVFEDHNKTSVPCNKEHFGGNLSHMESTMWLEPESSFRAGKCPGENTLKKELWTRFEAASAKGLPSKTPSTLLLTGLYRLIILPLASYCFVPFPPLPTSTKALSSLHHLCKIPSKSFLPVNSETLSYLCSLSMAKLDQLTRHIESYVDSSATPAQQVVSVDAIGNLVKNNALTLEALVRELEMYLTTTDDIIRARGIHLLAEVLTRIESKPLDNATVHSLIAFFKDRLGDWRALQGALVGCLAMIRRKNNLGVVTDSDAKAVAQSFLENLPVQSLGQHDRKLCFELLNSLLELYSDAVSSVGENLVYGICEAMDAEKDPECLMLAFHCVESLARLYPDPSGVLANFARDIFEILESYFPIHFTHPRGGHIDVQRDELSRALMSAFSSTPVLEPFVIPLLLEKLSSSLLSAKIDSLKYLKACSSKYGAERMANHARAIWSSLKDAISTYLEEPVFSFTSEPLVGVNFQKNEIVTEALSLLQLLIKQNSGLLVSLIIDDGDVNMVFDSISCHEKYNDIPVQEKQKIHVIGRILYVTAKTSFSSCNLVFQSLFSEMMDALGFPTKEINSLPIDNMLPPTGVKFGFLYLCIELLSGCRDLIVLSEEPGLNWDFEHETFCTILNNFSISLFNAFGSALSFGADNHILDPDIYIGVKGLQILAIFPGDTFPITKLLFENMLRKFMSVITEDFNKTLLWEEALKALVHIGSYIHNFHESEKAKSYRSFVVEKIVKLLSLENSTMPFPLKLEALSDIGMTGMMHMQKVLQEFEGAVFANLSMIFVHGNLRSSETVQLLECCSDKLLPWIHENECSEESVVQFAVEIWSHIGMCMGFSVPFEEKGLLGAIMKVMKLAVGHCSVESQNIIIKKAYDILSSHTSFQFQELEGSPLTPGQYDVSDRDKWVLSIFASAVIAVRPQTCIPNERIVLHLFIITLLRGVVPVAQALGSMINKMVSKSEVTETSSDLSLEEALDIIFNTKIVGKKYRQMNQGNDVVLTDLCLGVGTDRSLQTNALCGLSWLGKGLLLRGHEKIKDVTMILLKCLSFGTKSALPLIQDSQEEIHMKNLDPLVMKCAADAFHILMSDSEDCLTRKFHVRMRPLYKQRFFSSLMPIYLQLIPKSDSSISRSVLYRAFAHIISDTPLIVVLSEAKKLIPVILDCLSILTEDIQDKDMLYGLLLVLSGILTEKNGHEAVAENIHIIINGLIRLVEYPHKSLVRETAIQCLVAMSEMPYARIYPMRRQVLSAISRALDDKKRAVRHEAVKCRQAWLTSHWQSLLPRITQRQLAFLITGHNELSVYKTSSAIHNLDHVLH 1528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0317 1528 Pfam Dos2-interacting transcription regulator of RNA-Pol-II 400 667 IPR029240 -
Lele40g0317 1528 Gene3D - 324 719 IPR011989 -
Lele40g0317 1528 SUPERFAMILY ARM repeat 323 1480 IPR016024 -
Lele40g0317 1528 Pfam RNAPII transcription regulator C-terminal 1004 1443 IPR024687 -
Lele40g0317 1528 Gene3D - 1264 1498 IPR011989 -
Lele40g0317 1528 PANTHER DNA REPAIR/TRANSCRIPTION PROTEIN MET18/MMS19 355 1485 IPR039920 GO:0097428
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0317 Lele-ChrLele40 2570097 2582572 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele40g0317 40 2570097 2582572 Lele40g0317 40 2570097 2582572 ECH
Lele37g0355 37 2978489 2980665 Lele40g0317 40 2570097 2582572 hybridization
Lele38g0337 38 2699104 2712034 Lele40g0317 40 2570097 2582572 hybridization