Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0256 ATGGTTGATAGCAATGCATCTTCTGGATCTCCTGAAGAAACTCAAAACCCCGTTCCAGGTGGAAATGCACCTTCAGAAAGTGATCTTGTGCTTGATACTCTAGCCCAAAAGATTCAGGAGCCTCTTTTTCTAGAGAAAAAACATAAATTTTGGGAAACTCAACCTGTTGGGCAGTTCAACGATATAGGAAATACCAGTTTGCCCGAAGGCCCTATTGAACCTCCAACTCCCTTATCCGATGTTAAACAAGAACCATATAACCTTCCTAACCTCTATGAATGGATTACTTGTGACATCAACTCTGAGGAGTTAATTGATGTTGGATTCTCTCGGCTTGGTGCACGAATGACAATGAGTCGAACAATCAAGCTTTATAAGTTACCAGAGTCAACAGTCAGTCCGGGATTCAGAAAGATGGAAATACATGATGTTCCTGCAGTTACACGGCTACTTAGGAATTACCTAAGCCAGTTTGTTGTTGCACCTGATTTTGATGAAAACGATGTGGAGCATTGGCTTCTTCCGAAGGAGAATTTTGTTGATAGCTATGTGGTTGAGAGTCCTGAAACTCATGAGATCACTGACTTCTGCAGCTTTTACACGCTTCCTTCAACCATCCTTGGAAACCAAAACTATTCTATTTTGAAAGCAGGGTATTCCTATTATAATGTTTCCACAAAGACTCCTTTGCTTCAGCTCATGAACGATGCTCTTATTGTCGCGAAACAAAAGGACTACGATGTTTTCAATGCCTTGGATGCCATGCAGAATGAATCCTTCTTGAAGGAATTGAAATTTGGACCAGGTGATGGGAAGCTTCACTACTATCTTTACAACTACAGAATACGGCAGGCTCTGAATGCCGCAGAGCTTGGACTTGTGCTTCTATGGTCCTGA 897 0.4181 MVDSNASSGSPEETQNPVPGGNAPSESDLVLDTLAQKIQEPLFLEKKHKFWETQPVGQFNDIGNTSLPEGPIEPPTPLSDVKQEPYNLPNLYEWITCDINSEELIDVGFSRLGARMTMSRTIKLYKLPESTVSPGFRKMEIHDVPAVTRLLRNYLSQFVVAPDFDENDVEHWLLPKENFVDSYVVESPETHEITDFCSFYTLPSTILGNQNYSILKAGYSYYNVSTKTPLLQLMNDALIVAKQKDYDVFNALDAMQNESFLKELKFGPGDGKLHYYLYNYRIRQALNAAELGLVLLWS 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0256 298 PANTHER N-MYRISTOYL TRANSFERASE 44 103 IPR000903 GO:0004379|GO:0006499
Lele40g0256 298 ProSitePatterns Myristoyl-CoA:protein N-myristoyltransferase signature 2. 265 271 IPR022678 GO:0004379
Lele40g0256 298 PIRSF N-myristl_transf 22 105 IPR000903 GO:0004379|GO:0006499
Lele40g0256 298 PIRSF N-myristl_transf 99 296 IPR000903 GO:0004379|GO:0006499
Lele40g0256 298 Gene3D - 47 100 - -
Lele40g0256 298 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 99 295 IPR016181 -
Lele40g0256 298 Gene3D - 101 296 - -
Lele40g0256 298 Pfam Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain 106 284 IPR022677 GO:0004379
Lele40g0256 298 MobiDBLite consensus disorder prediction 1 22 - -
Lele40g0256 298 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 46 106 IPR016181 -
Lele40g0256 298 MobiDBLite consensus disorder prediction 1 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0256 Lele-ChrLele40 2034138 2035448 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0256 99 296 Acyl Lipid Metabolism Gene Families AT5G57020 80.808 5.03e-116 339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0279 37 2357413 2358717 Lele40g0256 40 2034138 2035448 hybridization
Lele38g0270 38 2160163 2163270 Lele40g0256 40 2034138 2035448 hybridization