Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0213 ATGTCTGCAACTATAATCAGCGATCCAGTGGTTATGTCAAACCCAGAAACCCAACCAGTGGCTCCAAGTAACATTCTAGTTTCTACCCAAACAGAAGTTGAATCTGCAATCTGTGATTGCTGTGGACTGACAGAAGAATGCACTCCTGCATACATAGAACGAATCAGAGAGAGATACTATGGGAAATGGGTTTGTGGGTTATGTGCAGAAGCTGTAAAAGATGAGATCTTGAGGTCTGAAAGGCTTATTAGTACAGAAGAAGCCATGGCAAAGCACATGAACTTCTGCAAAAAGTTTAACACTTCAGGGCCTCCTCCTAATCCAACAGTGAATTTGATCTCAGTCATGAGACATATTCTTAGGAGGAGTTTGGATTCTCCGAGGGGATTAAGGTTAAGATCCACACCAAGTAGTCCAACTAAGATGTCTGACACAGAAATTCATACTACTCCTGGGCTTACCAGGTCTGAAAGTTGCATCCCTAGCCTGTCTGCTTCATCATGA 504 0.4286 MSATIISDPVVMSNPETQPVAPSNILVSTQTEVESAICDCCGLTEECTPAYIERIRERYYGKWVCGLCAEAVKDEILRSERLISTEEAMAKHMNFCKKFNTSGPPPNPTVNLISVMRHILRRSLDSPRGLRLRSTPSSPTKMSDTEIHTTPGLTRSESCIPSLSASS 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0213 167 PANTHER OS01G0745000 PROTEIN 27 164 IPR012876 -
Lele40g0213 167 Pfam Protein of unknown function (DUF1677) 33 122 IPR012876 -
Lele40g0213 167 MobiDBLite consensus disorder prediction 128 167 - -
Lele40g0213 167 MobiDBLite consensus disorder prediction 130 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0213 Lele-ChrLele40 1648726 1649229 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele39g1201 39 20719546 20721224 Lele40g0213 40 1648726 1649229 ECH
Lele40g0213 40 1648726 1649229 Lele40g0213 40 1648726 1649229 ECH
Lele40g0213 40 1648726 1649229 Lele01g0717 01 4209932 4211186 ECH
Lele40g0213 40 1648726 1649229 Lele03g0715 03 4222166 4226133 ECH
Lele37g0224 37 1734320 1734823 Lele40g0213 40 1648726 1649229 hybridization
Lele38g0225 38 1762849 1763352 Lele40g0213 40 1648726 1649229 hybridization