Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0211 ATGGCTACTGCAGTCGGTGCAGTTGCTCTTTTATACTATACATTAAATCGGAAATTACAGTTGCATACAGAGAACGGAGATGAGGATGAGAACACAATATCCACATTATCAGACACTCTTAGATTTACCTATTCTGAGACTCTTGGCAAGCGGCCAATTGGAGACTTGGCATTTGGTATAAATTTTCTTCTGAAGAGGCAGGGAAACTTTCATGTTGAGAGTGAATTTGGGGGTAAGGATAGTTTACAGCCGAAAGGACCTGAGATTGTAGGGCACTCCTTGGGTGGAGGCACTGCCGCACTTCTGACATATATATTAAGAGAGCGAAAGGAACTGTTTGAGACTACATGTGTTACATTTGCTCCAGCTGCTTGTATGACATGGGAGTTGGCTGGTTCAGGGAATGGTTTTATCACTTCTGTTATAAATGGAGGCGATTTGGTGCCAACATTCTCAGCCGCTTCTGTGGATGACTTGCGGGCCGAGGTTGTGATGAGGAGAGCCAGGAGCATGGCTCATGCAGCATGGACACATCCACCTATTAACTCGTCCTCTTGGTTATGCATGGGACCCCGTCGCCGATTGTTGGCCGTGCATTTGAATTCCAAAGTATCTGGAAGCTCTCCTAGATCTGGCGATGCGGAGAGTTCTGATCCACTTTTGTCTCCCAAGAAAGGCATGAATGTGACCGCCGTTCAGAATGTGGACCTTCCGATATCTTCAAGTGTAGGAGGGTGGTCTTCTGAAATTGAATGCTCTTGTGCTGATAGAATGAGTCCACGTTCTAAGGGGAATGCTGATCTCAATGACAGCGACGACATCATGGAGCTTGAAACACACGAGGATAAAATGACCGAAGTGGAGCTGTGGCAACAACTAGAGCATGAACAGTATGACAGTAATGAAGGCGAGGAGGCTGATGTGATAAAGGAGATGAGGGAAGAAGAAGCAGCCATGGCGGAAACAACCAGTGGCCAAACCCAGAGCTCTGCTCTAGAAATGGAAGAAGTTCACAGGTTCTTCCCTGCGGGAAAGATCATGCATATTGTTACCCTCCACCCTGATGATGCAAGGAGGGAAAGTGATGGTAGTTCAAGCTCTATGAATTCAGATGATAGCCAGCCAGATGAGACTAAGATTGGGATTTTCATAACTCCGAGATCTTTGTACAGCAAACTGAGACTTTCACAAACCATGATTAGCGATCACTTCATGCCGGTTTATAGAAGGCAGATTGAACGGCTAATAGAGGAACTTCAGGAGGAAGAATCTAATGAAGAGGATCAAACACTCGAGAGGTAG 1302 0.4593 MATAVGAVALLYYTLNRKLQLHTENGDEDENTISTLSDTLRFTYSETLGKRPIGDLAFGINFLLKRQGNFHVESEFGGKDSLQPKGPEIVGHSLGGGTAALLTYILRERKELFETTCVTFAPAACMTWELAGSGNGFITSVINGGDLVPTFSAASVDDLRAEVVMRRARSMAHAAWTHPPINSSSWLCMGPRRRLLAVHLNSKVSGSSPRSGDAESSDPLLSPKKGMNVTAVQNVDLPISSSVGGWSSEIECSCADRMSPRSKGNADLNDSDDIMELETHEDKMTEVELWQQLEHEQYDSNEGEEADVIKEMREEEAAMAETTSGQTQSSALEMEEVHRFFPAGKIMHIVTLHPDDARRESDGSSSSMNSDDSQPDETKIGIFITPRSLYSKLRLSQTMISDHFMPVYRRQIERLIEELQEEESNEEDQTLER 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0211 433 Pfam Lipase (class 3) 89 153 IPR002921 GO:0006629
Lele40g0211 433 MobiDBLite consensus disorder prediction 203 224 - -
Lele40g0211 433 MobiDBLite consensus disorder prediction 356 380 - -
Lele40g0211 433 PANTHER LIPASE CLASS 3 PROTEIN-LIKE 1 89 - -
Lele40g0211 433 Coils Coil 405 432 - -
Lele40g0211 433 Pfam Lipase 3 N-terminal region 32 87 IPR005592 GO:0016042
Lele40g0211 433 Gene3D alpha/beta hydrolase 84 177 IPR029058 -
Lele40g0211 433 SUPERFAMILY alpha/beta-Hydrolases 89 154 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0211 Lele-ChrLele40 1636001 1639819 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0211 10 89 Acyl Lipid Metabolism Gene Families AT3G14075 53.704 5.74e-24 102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele40g0211 40 1636001 1639819 Lele40g0211 40 1636001 1639819 ECH
Lele37g0222 37 1720663 1725073 Lele40g0211 40 1636001 1639819 hybridization
Lele38g0223 38 1750742 1754732 Lele40g0211 40 1636001 1639819 hybridization