Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0168 ATGGTTTCGAATAGTGGACGCGTTTCTGGTATTAAGAGCTCCACCAGAAAGAAGACGTTGGGTTTTGATTTCATGGCGGTGGTGGCATTGATAGTGTATTCGTTTTGTGTGCTTCCAATTGGTGTATTGGCGGCGAAACAACCGATCCCAAAAGGGACGCAGAAGCTGAGGTTCGATGCGAATGGAGAATTCAAGATATTGCAGGTGGCAGATATGCACTATGCAAATGGCAAGAGTACCCTTTGCTTAGATGTGCTTCCTTCTCAGAATGCTTCTTGCTCTGACCTTAATACCACCGCCTTTGTTCAGAGAATGATCCTCGCCGAGAGGCCCAATCTCATCGTTTTTACTGTTCATGTCCATCGTTGTGGGGTGACAACAGGGGATAACATCTATGGATTTGATTCCTCGGATTCGGCTAAATCATTGGATGCTGCATTTGCTCCAGCGATTGAATCCAACATTCCTTGGGTGGCTGTTTTGGGAAACCATGATCAGGAAGGAACACTCTCTAGGGAAGGTGTGATGAAACATATTGTGGGGATGAAGAACACTCTTTCTAAACCCAATCCTTCAGAAGTTCACATCATCGATGGTTTTGGGAACTATAACTTGGAAATTGAAGGAGTTGAGGGAACTGAATTCGTAAACAAATCAGTTCTCAATCTTTACTTTCTTGATAGTGGTGATTACTCCACTGTCCCTTCAATTACTGGCTATGGTTGGATCAAACCCTCCCAGCAATTCTGGTTCCAACGAACATCTGCAAAACTTTGGAGAGAATACATGCATAAACCAGTGCCTCAGAAAGCGCCTGCTCCTGGTCTTGCATACTTTCACATCCCATTGCCAGAATATGCTTCTTTTGACTCATCAAACTTCACAGGTGTAAAACAGGAAGGCATTAGCTCTGCGTCCGTGAACTCCGGCTTCTTTACGACGCTAGTCGAAGCCGGAGATGTGAAGGCAGTTTTCGTTGGCCATGATCATGTCAATGACTTCTGTGGCAAGCTAACAGGTCCTATGGAGCAAGAGCTTTCATTGAATCTGGGATATGGACGGGCCTTTGTCATGGCATTAGTAAATACAATGCTTTTGGCTTATGTGACTAGGCTTGTTGAAGACCGCATGGTCAAGCAAGCGTTTAGGCTGTATCAGAAGAAAACATCGGTGTGGGTCCCTTGGTTGAAGTCCTCTGCTTGGGGAGAAAAAGATGAGGACTCTTGA 1227 0.4515 MVSNSGRVSGIKSSTRKKTLGFDFMAVVALIVYSFCVLPIGVLAAKQPIPKGTQKLRFDANGEFKILQVADMHYANGKSTLCLDVLPSQNASCSDLNTTAFVQRMILAERPNLIVFTVHVHRCGVTTGDNIYGFDSSDSAKSLDAAFAPAIESNIPWVAVLGNHDQEGTLSREGVMKHIVGMKNTLSKPNPSEVHIIDGFGNYNLEIEGVEGTEFVNKSVLNLYFLDSGDYSTVPSITGYGWIKPSQQFWFQRTSAKLWREYMHKPVPQKAPAPGLAYFHIPLPEYASFDSSNFTGVKQEGISSASVNSGFFTTLVEAGDVKAVFVGHDHVNDFCGKLTGPMEQELSLNLGYGRAFVMALVNTMLLAYVTRLVEDRMVKQAFRLYQKKTSVWVPWLKSSAWGEKDEDS 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0168 408 PANTHER PHOSPHATASE DCR2-RELATED-RELATED 39 357 - -
Lele40g0168 408 Gene3D - 119 352 IPR029052 -
Lele40g0168 408 SUPERFAMILY Metallo-dependent phosphatases 62 338 IPR029052 -
Lele40g0168 408 CDD MPP_Dcr2 62 356 - -
Lele40g0168 408 Pfam Calcineurin-like phosphoesterase 64 331 IPR004843 GO:0016787
Lele40g0168 408 PIRSF Ptase_At2g46880 13 389 IPR011230 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0168 Lele-ChrLele40 1321977 1324230 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele40g0168 40 1321977 1324230 Lele40g0168 40 1321977 1324230 ECH
Lele37g0165 37 1350511 1353212 Lele40g0168 40 1321977 1324230 hybridization
Lele38g0173 38 1400682 1402782 Lele40g0168 40 1321977 1324230 hybridization