Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1314 ATGAATCCATTTCAAGACCCGCAACACAATCAAGAGAACGTGTCTGCAACTAATTCCCAAGCTACAGGAATGGCGATTGCACCGTGGAAGCAGCTCCTGATCAACGCTTTGGAATCCAACGCTCACCTAAAGCATTCTTCTTACTTCCAGCTCGCAACGATTGGAACTAATGGAAGACCTTCGAATCGCACAGTTGTTTTCAGAGGATTCCAAGACAACACTGATAAGATCCAAATAAATACCGATGGCCGCACTCACAAGATTGAAGAGCTCAAGCATTGTTCTTTTGGCGAGATATGTTGGTATTTTACGGATTCCTGGGAGCAATTCCGGATAAATGGACAAATAGATATCATTGATGGATCGAATCCTAGCCCTTTAAAACTTCAGCAAAGAGAGCAGTCCTGGTTTGCAAGTTCACTGAGATCAAGGTTGCAGTATTTGGGGCCTAACCCAGGACTTCCCTGTCTAAGTGAAGAAACACAGCCAGAAATATCTTTAGATCCTTCTACTGGTCCAGTTGATGCTTTTTGTTTGCTGATTCTAGACCCGGATCAGTTTGATTACGTGAATTTGAAGAGTAACTTGAGGCTAACATATAAATCAAGTGTCAGTGCCGCTGCAGAGAAAAGCTGGAGTGTGGAGAGAGTCCATCCATAA 660 0.4348 MNPFQDPQHNQENVSATNSQATGMAIAPWKQLLINALESNAHLKHSSYFQLATIGTNGRPSNRTVVFRGFQDNTDKIQINTDGRTHKIEELKHCSFGEICWYFTDSWEQFRINGQIDIIDGSNPSPLKLQQREQSWFASSLRSRLQYLGPNPGLPCLSEETQPEISLDPSTGPVDAFCLLILDPDQFDYVNLKSNLRLTYKSSVSAAAEKSWSVERVHP 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1314 219 Pfam Pyridoxamine 5'-phosphate oxidase 27 119 IPR024624 GO:0010181
Lele39g1314 219 PANTHER PYRIDOXINE-5-PHOSPHATE OXIDASE 9 219 IPR000659 GO:0004733|GO:0008615|GO:0010181
Lele39g1314 219 Gene3D - 24 219 IPR012349 -
Lele39g1314 219 SUPERFAMILY FMN-binding split barrel 20 219 - -
Lele39g1314 219 TIGRFAM PPOX_FMN_cyano: PPOX class probable FMN-dependent enzyme, alr4036 family 26 219 IPR024015 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1314 Lele-ChrLele39 21587064 21588802 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele39g1314 39 21587064 21588802 Lele39g1314 39 21587064 21588802 ECH
Lele37g0112 37 894861 896502 Lele39g1314 39 21587064 21588802 hybridization
Lele38g0116 38 892644 895728 Lele39g1314 39 21587064 21588802 hybridization