Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1226 ATGGCCACAACATTATTCTCTCTCTCTTGTGTGGTTCTGATCCTTCTGAGCTCTGTAAGTTGCAACAGTGGCGGATTGGTCCCACCACATAAGCGCGCTCTGTTTGTGTTGGGAGATTCTCTCTTTGATCCTGGCAATAACCAATACGTCGACACTACCCACAAAGATGCAGCTTCTCATTTGCCTTATGGCATCACCTACTTCAAGCATCCCACCGGCAGAATCTCCGACGGCCGTGTCGTACCCGATTTCATAGCTATGTTTGCCAAGTTGCCTGTATTTGTTGCATATCTAAAACCAGTATCTCATGACCTCACTAATGGTGCCAATTTTGCATCTGGTGGATCAGCCGTTCTTGGTCAAGGTGCTAATGGCATTATCTCTTACTCAAAACAAGTAAGCTACTTGAAGGATGCAGTAAAAAGACTGAAACAAAAATATGGTGAAAAAGAAGCCAAGAGGATTGTGGGGAGCGCCGTGTACTTGTTCAGTATAGGAGGTAACGATTACTTCAGTCTCTATCAAAACCTCACAGCCTCAGAACAAGCCCAACATGCCAGGAACGTCATTGGCAACTTGACCAACTCCCTCAAGGAAGTATACGGGCTAGGTGGCAGAAAAATTGCGTTTCAAAACGTAGGACCTTTGGGGTGTACACCTTCGAACAGAGCAACAACCACTAATCCCAGTGGTCGCTGTGTTGAATTCTTACTGGCTATGGCAAGACGACACAACAGGGCTCTGTCTGTAGCACTTCACAAGTTGGAGACGACGTTACCTGGATTCAAGTACTCCATATTTGATTACTACAATGCTATTCTAGACATGGGCAACAATCCTTCCAAATATGGGCTTAAGGAAGGGAAATCGGCATGCTGTGGAACTGGTGCCTATAGAGGAAGTGGGTGTGGAGGAGGGTTCAGTGGGAACGAAACGTTCAAGGTATGTCGTAATCCGAGTGACTACCTGTGGTTCGACGGAGGCCATACAACTGATGGTGCCAACAAGAAATTAGCAGAGCTCATATGGAATGGATCACCACGACATATAACAGGGCCTTATACTGTCAAGCAGCTTTTTCAATCCCTATGA 1092 0.4606 MATTLFSLSCVVLILLSSVSCNSGGLVPPHKRALFVLGDSLFDPGNNQYVDTTHKDAASHLPYGITYFKHPTGRISDGRVVPDFIAMFAKLPVFVAYLKPVSHDLTNGANFASGGSAVLGQGANGIISYSKQVSYLKDAVKRLKQKYGEKEAKRIVGSAVYLFSIGGNDYFSLYQNLTASEQAQHARNVIGNLTNSLKEVYGLGGRKIAFQNVGPLGCTPSNRATTTNPSGRCVEFLLAMARRHNRALSVALHKLETTLPGFKYSIFDYYNAILDMGNNPSKYGLKEGKSACCGTGAYRGSGCGGGFSGNETFKVCRNPSDYLWFDGGHTTDGANKKLAELIWNGSPRHITGPYTVKQLFQSL 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1226 363 SUPERFAMILY SGNH hydrolase 34 344 - -
Lele39g1226 363 Gene3D SGNH hydrolase 28 347 IPR036514 -
Lele39g1226 363 Pfam GDSL-like Lipase/Acylhydrolase 34 342 IPR001087 GO:0016788
Lele39g1226 363 CDD SGNH_plant_lipase_like 33 346 IPR035669 -
Lele39g1226 363 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 12 361 IPR044552 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1226 Lele-ChrLele39 20903894 20906249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g1226 29 362 Acyl Lipid Metabolism Gene Families AT4G10950 30.145 2.15e-48 166
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele39g1226 39 20903894 20906249 Lele39g1226 39 20903894 20906249 ECH
Lele37g0196 37 1560129 1562444 Lele39g1226 39 20903894 20906249 hybridization