Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1224 ATGCGGCGGCAGCTCAGGGGCGGCGGAGCCGGTGGCGGCCATGGCTCAAAGAAGCAGAATGCGCCCGCTTTCATTCTGAAGCTGAGAAAGACGCACAAGAAGGGAATGGCTCGAGGCAGAGTTGCAGGCTTTGCAATAGCAGAGCTACTTCAAATTGGGCCTCAATTTTCACTTAGGAGGCTCTTAAGCCCTACTTGTTTTTCGACATCAACCTCTGAAAATCATCACTTGATTCCGGAAGTGTTTTCTCCTTCCCATTTTCATGCAGCAATGGCTATAGAGAATTCGAAGAAGTCCTCAAAGAAGCCTGACGATATTGATCTTCTGAAATCAGATGTCGCCTCTTTCGCTTCTTCTCTTGGACTATCGTCCTCTTTAACTTCTTCATCTTCAGGCTTCAACGATGTTGATTTTAGCAAAAAAGTTGATAAGGTGTCAGCGTTCTCAGTAATGGTGGGAGACAATCCAATTGCTAATTTACGGTCACTTGATGCCCTCGTGGGAATGGTGACATCTAAGGTCGGAAAACGCCATGCATTAACTGGATTTGAAGCACTACAAGAATTGTTCATCTCAAGATATGAAAGATTTGTTATCGCACTTGAAGAAGCATCCAGAGACATGTTGCCTGTGCTTAAAAACAAAGCCTTAAAGTCCGTATACGTGCTATTGAGGAGCAAATCAGAGCAAGAGCGCAAACTACTTTCTGCCCTTGTTAATAAACTTGGGGATCCGGATAACAAGTCAGCATCTAATGCTGACTTTCATTTGTCAAACCGCATGTCTGACCACCCAAATATGAAGGGTATGGTTATTGATCAGGTTAACTTCTTGAGCCAAATCCGTCTCACACGTAAGGGAGGTGGGCCAAAAGTGGCAAAACGTTTAATAGATGTATATTTTGCTCTATTTAAGGTCTTGATTTCTGGAGCAAGCAGGAATCAAAATCGAAAGATTGATAAAAGCAAGAAGGCAAAATTTAAAGGTGAAAAGTCGAAAGATGCACCAGAATCACATGCTGAATTGGATTCACGGCTTCTATCAGCTCTCTTAACTGGAGTAAATAGAGCATTCCCCTTTGTCTCTAGTGATGAAGCTGATGATATTATTGATGTTCAAACACCAGTACTCTTCCAATTGGTGGAAATGTTTGTTGGACTTATTCTGAGAGCAATGAAGAGGGATGTGAATTTAAAGCGTGTGGCTGCATTTTCTAAACGCCTTTTGCAGGCAAGTGGTGAACTGAACTTTTACCGCCTTGTTGCGCTTCAACAGCCGCCACAGTATGCCTGGTCATGCCTTTTCCTTCTTTCTGAACTCCTTAAAGCAAGACCACCTTTATGGAACCTCATGTTGCAGAACGAGTCTATTGATGAGGAGATTGAACACTTTGAAGATGTTAAGGAAGAAACTGATGCTGAACCCAGCACTGCGACAAATATGGTGATGATGTCTGGATATGGTGATGATCACAATTCTGAGAATGAATCTTCGGAAAAGGTAGAGGAAGATGACCTTCCAAAATCTTCCGATTCTGAAGATGATTCAGATGATGCTGATCTTTTGCCGGCAAGGAATGAAAAAGTTCCTGAGAATTCAAAATATGCATCCGATGATGAAGATCACCAGTCACAGTTATCCTCCAACAAGTCTTTGTTGCCTGGAGGTTACAATCCAAGACACAGAGAGCCTTCTTTTTGCAATGCAGACCGTGTTAGTTGGTGGGAGTCAATGGTTCTTGCTTCACATTCACACCCATCAGTAGCTACTACAGCCAGAACTCTTCTTTCTGGAGCCACCATTGTCTATAATGGAAACCCACTAAATGACCTATCGCTGACAGCTTTCCTAGATAAATTCATGGAGAAGAAGCCAAAACAGAGCACATGGCATGGTGGTTCTCAGATTGAACCTGCCAAACAGATGAGCATTAACAACCATTTGATTGGACCAGAAATTCTCTCACTAGCTGAAGTAGATGTGCCGCCAGAGGATCTTGTCTTCCACAAGTTCTACACAAACGAAATGAGTTCCAAGAAACCAAAGAAGAAGAAGACAGCCGAAGAGGAGGCTGCTGAGGATTTGTTTAATGTTGATGGCGGTAGTGATGTAGATGGGGGCGATGAGAGCGACAACTAA 2139 0.432 MRRQLRGGGAGGGHGSKKQNAPAFILKLRKTHKKGMARGRVAGFAIAELLQIGPQFSLRRLLSPTCFSTSTSENHHLIPEVFSPSHFHAAMAIENSKKSSKKPDDIDLLKSDVASFASSLGLSSSLTSSSSGFNDVDFSKKVDKVSAFSVMVGDNPIANLRSLDALVGMVTSKVGKRHALTGFEALQELFISRYERFVIALEEASRDMLPVLKNKALKSVYVLLRSKSEQERKLLSALVNKLGDPDNKSASNADFHLSNRMSDHPNMKGMVIDQVNFLSQIRLTRKGGGPKVAKRLIDVYFALFKVLISGASRNQNRKIDKSKKAKFKGEKSKDAPESHAELDSRLLSALLTGVNRAFPFVSSDEADDIIDVQTPVLFQLVEMFVGLILRAMKRDVNLKRVAAFSKRLLQASGELNFYRLVALQQPPQYAWSCLFLLSELLKARPPLWNLMLQNESIDEEIEHFEDVKEETDAEPSTATNMVMMSGYGDDHNSENESSEKVEEDDLPKSSDSEDDSDDADLLPARNEKVPENSKYASDDEDHQSQLSSNKSLLPGGYNPRHREPSFCNADRVSWWESMVLASHSHPSVATTARTLLSGATIVYNGNPLNDLSLTAFLDKFMEKKPKQSTWHGGSQIEPAKQMSINNHLIGPEILSLAEVDVPPEDLVFHKFYTNEMSSKKPKKKKTAEEEAAEDLFNVDGGSDVDGGDESDN 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1224 712 MobiDBLite consensus disorder prediction 323 339 - -
Lele39g1224 712 Pfam CBF/Mak21 family 295 592 IPR005612 -
Lele39g1224 712 Coils Coil 454 474 - -
Lele39g1224 712 MobiDBLite consensus disorder prediction 519 545 - -
Lele39g1224 712 MobiDBLite consensus disorder prediction 676 712 - -
Lele39g1224 712 MobiDBLite consensus disorder prediction 464 557 - -
Lele39g1224 712 PANTHER CCAAT-BINDING FACTOR-RELATED 143 192 IPR040155 -
Lele39g1224 712 MobiDBLite consensus disorder prediction 676 692 - -
Lele39g1224 712 MobiDBLite consensus disorder prediction 1 22 - -
Lele39g1224 712 MobiDBLite consensus disorder prediction 492 507 - -
Lele39g1224 712 MobiDBLite consensus disorder prediction 319 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1224 Lele-ChrLele39 20875134 20880776 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele39g1224 39 20875134 20880776 Lele39g1224 39 20875134 20880776 ECH
Lele38g0201 38 1588439 1594220 Lele39g1224 39 20875134 20880776 hybridization