Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1180 ATGGAAGGTGATATCTTTGGGGACTTGAGTAATATTAATACAACAGTACAGGTAGATAGCAGAATCATTCAGGCGTTTCAGAAGAACTTGCTTGAAGCCCAGGACATTTTGGATCAAAACAGATTGCTAATCAATGAGATTAATCAAAATCACTCGTCAAAGATGCCACATAATCTGAGTAGAAACGTGGGGTTGATCAGAGAGCTGAATAACAACATCAGAAGGGTGGTTGATCTCTATACTGATCTTTCCAGTTCTTGTATCAAGTCTCGAGAAGCTTCATCTGAAGGGGATTCCAGTGGAACTCTGAAGTCTGATGGAAAAGTAAGCCAAAAGAGAACTAGAATCAGCTAA 354 0.3955 MEGDIFGDLSNINTTVQVDSRIIQAFQKNLLEAQDILDQNRLLINEINQNHSSKMPHNLSRNVGLIRELNNNIRRVVDLYTDLSSSCIKSREASSEGDSSGTLKSDGKVSQKRTRIS 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1180 117 MobiDBLite consensus disorder prediction 86 107 - -
Lele39g1180 117 Pfam Early Flowering 4 domain 17 98 IPR009741 -
Lele39g1180 117 MobiDBLite consensus disorder prediction 86 117 - -
Lele39g1180 117 PANTHER PROTEIN ELF4-LIKE 4 14 115 IPR040462 GO:0042753
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1180 Lele-ChrLele39 20460993 20461346 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele39g1180 39 20460993 20461346 Lele39g1180 39 20460993 20461346 ECH
Lele37g0242 37 1945151 1946714 Lele39g1180 39 20460993 20461346 hybridization
Lele38g0244 38 1936848 1937225 Lele39g1180 39 20460993 20461346 hybridization