Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1078 ATGATGATTAGAGAGAGCAGAGATGTAAAGCCTATTCTATTGAAAGTTGGATTGGCTCTAACTCTTTCTATAGCTGGATATCTCTTCTCTCGCATCAGAATCAGAAGAATCAATTCATCTAATAGTAGGATTCACTCAGACCACCCTTCAGGTTATGAAAGTGACGTTAGTTCAGAAAAAACCCAAATCAAACAGCATCTTCCCGCCAAAAAAATAAAGCGAGTATCTAGATCAAGTTCTTGCGACAATTTTTCAGATGCACATTTTCTGGATACGGAAGAATCGTTCATCAAGAAGGTGATCAGTGATACGACACCCAGGTCAAAATTAGGATCTCCTCCTAAAGCATATGTAACTCCAGAAAAGGATGACTACTATGTAACTCCAGAAAAGGATGATTACGATCAAGAGATGAAGAATCTCAAGAACATCATCAAAATGCTTCAAGAGAGAGAAACGAGTCTCCAGGTTCAATTGCTCGATTACTACGATCTTAGAGAGAAAGAAACAGAGGTAATGGAGCTTCAAAACCGTTTGGCTATAAGCAATATGGAGGTGAAAATGTTCAATCTGAAGGTAGAGAATCTGGTGTCGGAGAATCGGAGGCTAGAAGCACAAATGGCGGATCATGCGAAACTTGTAGCAGAGCTTGAGCGTTCGAAAGCGAAAGTGAAGCTGCTGAAGAAGAGAATTAAGCATGAAGCGGAAGAGAACGGGGAATTGATAAGGAACCTTCAACAAAGAGTTATAAAATTGCAAGAAGATCACAAAGAGGCTGGTAGTGATGAAGATTTACAGATGAAGCTGCAGAAGCTGAAGGATTTAGAGACTGAAGCAGAAGAATTGAGGGAGTCGAATTTGAGATTGCAGATTGAGAATTCAGAATTGGCTCGAACATTGGATTCTACTCAGATGCTTGCAAATGCTTTTCTTGAAGATGCAGAGAAAGATGCTCTCAAGGAAGAAACTGAACGTCTGAAACGAGAGAACGAGAGCTTGACGAAGGAGATTGAGCAGCTTCAAGCAGATCGATGTACGGATGTTGAAGAATTGGTTTATCTTCGGTGGATTAATGCTTGCTTACGTTTTGAGCTCAGAAATTATCAGCCGCCACCTGGTAAAACTGTTGCAAGGGATTTAAGCAAAAGCTTAAGCCCTACCTCTGAGAAGAAAGCAAAACAGCTCATTCAAGAATATGCAAAATCTGAAGGAACAATGGATTTTGATTCACCTTCAGACCAATGGTCATCTTCTCAGGCTTCTTCTCTTCCAGACGCCGATGATTATCGCTCGCCTTTTGGAAATTCATCATCATCATCATCATCATCATCATCTGCCCCCAGACTCCACACTTCAAACAAGAACAAATTCTTTCACAAGCTTAGAAGATTGATCAAAGGCAAAGATAGGCAGCAGCATCGTGTTCAGCTTTCACCTGGGGAAAAATGTGGATCTCAAAATAGCAATTATTCCCCACAGTTCTGTTCATCAAGCGGATCAACTGGGAACGACACGTGTCGAAGGAATAGTAGGGACTTTGACAGTACTCCATATAGGATATACAGAAGTTCTTCTGATTTCCACAGGTTGACGATTCTCAAGGAAGAAGAAGACAGCACAAATTCAGATACAATAAACATAGAGAAAACTCCATTAATGAAATATGCAGAAGCTTTAAAAGATTCTTCTGGTGCATCTTCCACTCCCAAACGTGGCTTTGGAAGAAGATCAGCATCATATAGTTCATTTTAA 1752 0.4041 MMIRESRDVKPILLKVGLALTLSIAGYLFSRIRIRRINSSNSRIHSDHPSGYESDVSSEKTQIKQHLPAKKIKRVSRSSSCDNFSDAHFLDTEESFIKKVISDTTPRSKLGSPPKAYVTPEKDDYYVTPEKDDYDQEMKNLKNIIKMLQERETSLQVQLLDYYDLREKETEVMELQNRLAISNMEVKMFNLKVENLVSENRRLEAQMADHAKLVAELERSKAKVKLLKKRIKHEAEENGELIRNLQQRVIKLQEDHKEAGSDEDLQMKLQKLKDLETEAEELRESNLRLQIENSELARTLDSTQMLANAFLEDAEKDALKEETERLKRENESLTKEIEQLQADRCTDVEELVYLRWINACLRFELRNYQPPPGKTVARDLSKSLSPTSEKKAKQLIQEYAKSEGTMDFDSPSDQWSSSQASSLPDADDYRSPFGNSSSSSSSSSSAPRLHTSNKNKFFHKLRRLIKGKDRQQHRVQLSPGEKCGSQNSNYSPQFCSSSGSTGNDTCRRNSRDFDSTPYRIYRSSSDFHRLTILKEEEDSTNSDTINIEKTPLMKYAEALKDSSGASSTPKRGFGRRSASYSSF 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1078 583 MobiDBLite consensus disorder prediction 560 583 - -
Lele39g1078 583 MobiDBLite consensus disorder prediction 407 452 - -
Lele39g1078 583 MobiDBLite consensus disorder prediction 371 453 - -
Lele39g1078 583 MobiDBLite consensus disorder prediction 468 517 - -
Lele39g1078 583 MobiDBLite consensus disorder prediction 478 506 - -
Lele39g1078 583 Coils Coil 131 158 - -
Lele39g1078 583 Coils Coil 165 262 - -
Lele39g1078 583 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 10 471 IPR040265 -
Lele39g1078 583 Coils Coil 265 299 - -
Lele39g1078 583 MobiDBLite consensus disorder prediction 41 60 - -
Lele39g1078 583 MobiDBLite consensus disorder prediction 561 583 - -
Lele39g1078 583 Coils Coil 311 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1078 Lele-ChrLele39 19387024 19389716 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele39g1078 39 19387024 19389716 Lele39g1078 39 19387024 19389716 ECH
Lele37g0347 37 2887112 2890137 Lele39g1078 39 19387024 19389716 hybridization
Lele38g0330 38 2616800 2619434 Lele39g1078 39 19387024 19389716 hybridization