Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1038 ATGGAAGATTCAAAAGCTCTGGAAAGAATGGAGAAAAGGATAAGCAGCTTCTCGAATGGAGCCGTAGGTCACGAGGCGGAGGCCGCAGCTGCAAGGGGCCTTAGAGTGGTGAAGCTTCACAAAGGTTTTCTTCTCTGCGATTTCATCGTTCACGATGGCGTCACAGATGAAAATGGGAAGTGGCACGAAGGAGCAATGACGACTCTCATGGACGCCATAGCGAGCTGGACGGCCTTCTCCTTCACATCACAAGGCCAGGTCACTGTTAATCTGTCCGTCTCTTACTACTCAAAACCCGACCTCCAGGAAGTGGTGGAGGTAGAAGGGGAGGCGATGGGGGAGAAGGGAAAGATGACGTCGGTGAGGGTGGAGGTGAGGAATAAACACGATGGACAAATGGTTGCCTTAGGCGTCATGTGGATGTCATCTTCTCGTCCAAAAAACAAACCACGCTCTTCAAAACTGTAA 468 0.5085 MEDSKALERMEKRISSFSNGAVGHEAEAAAARGLRVVKLHKGFLLCDFIVHDGVTDENGKWHEGAMTTLMDAIASWTAFSFTSQGQVTVNLSVSYYSKPDLQEVVEVEGEAMGEKGKMTSVRVEVRNKHDGQMVALGVMWMSSSRPKNKPRSSKL 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1038 155 CDD PaaI_thioesterase 33 141 - -
Lele39g1038 155 Pfam Thioesterase superfamily 59 132 IPR006683 -
Lele39g1038 155 PANTHER THIOESTERASE SUPERFAMILY MEMBER-RELATED 3 137 IPR039298 GO:0047617
Lele39g1038 155 Gene3D Hotdog Thioesterase 4 147 - -
Lele39g1038 155 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 29 139 IPR029069 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1038 Lele-ChrLele39 19045009 19045709 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele39g1038 39 19045009 19045709 Lele39g1038 39 19045009 19045709 ECH
Lele37g0390 37 3252268 3252965 Lele39g1038 39 19045009 19045709 hybridization
Lele38g0368 38 2988340 2990200 Lele39g1038 39 19045009 19045709 hybridization