Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0943 ATGTGGAGCAATCTTCCCTTTGATGTTTTGGCCAATATCTTCTCCTTTCTCTCCCCAGATTCTCTAGCCATAGCTAGATCCGCCTGCAAGAATTGGCACCTATGTTCCAAGAACTTACCAGCCTCTAGACCACACTCTAATCATCACCAACCATGGTTCTTGGCTTTGCCAATTAGGAACCAGAAGCCATATCTGTATGCTCACAATCCAGTTCTGAACAATTGGTACCAGATATCCCTAGAGTTCTTACCAGTTCCAGCAGTGAGAGTAGTTTCTCCTATTGGGAGCCTCCTTCTGTTGAAAATATCTCATTCTACTACTCTCCAACTTGCTATCTGCAATCCCTTTTCAAGCCAGTTTAGATATCTTCCTCAATTGAACATTTCAAGAACAAACCCAGCAGTGGGGTTTGTAGTTTTGAACCCGGGAGTTCAATTTCCTTCCTTTAGAATCTATGTAGCCGGAGGGATGTCTGAGGCGGCGCAAGGTGGTGGCGCCACCTATGAACCTACGATAGAGATGTATGACTCAGAGCTTGACAAGTGGCAGATTGTGGGGTCCATGCCGGTGGAATTTGCTGTTAGGCTTACGGTTTGGACTCCAAATGAGAGTGTACGCATAGAGAATGTGTTGTATTGGATAACTTCTGCAAGAGTTTACAGTGTAATTGGTTATGACATTTCCGCAAACACATGGAAGGAGCTAAGTGTTCCAATGGCAGAGAGGCTAGAATTTGCCACACTGGTTGGGAGGAATGGGGTTTTGTGTTTGGTTGGAGGGACAAGTGGTGGTGGGAATGCAAATGCTTGTGTTTGGGAAATGAAGGAATGGAATGTTTGGGATTTGACAAATAAGGTACCAAGTGAATTGGGGTGGAAATTGTTGGGAGGGAACAAGAAGAGGAATTGGGAAAGTACAAAGTGTGTGGGAAATGATGAAACTATTTGTTTGTACAGAGAGCTTGGGTCAGGCATGGTGGTTTGGAGAAAGGTTAGAGATAAGAGTGGAAGTGAATGGGAATGGAATTGGGTTGGAGGGTGTGATTTCGTCAAGGGTAAAAAAGTCCACAACTGCTCAATAAGGGGAATTCTAATTCACCCAAGTCTAGCTTCTTGCATCTTTTGA 1125 0.4427 MWSNLPFDVLANIFSFLSPDSLAIARSACKNWHLCSKNLPASRPHSNHHQPWFLALPIRNQKPYLYAHNPVLNNWYQISLEFLPVPAVRVVSPIGSLLLLKISHSTTLQLAICNPFSSQFRYLPQLNISRTNPAVGFVVLNPGVQFPSFRIYVAGGMSEAAQGGGATYEPTIEMYDSELDKWQIVGSMPVEFAVRLTVWTPNESVRIENVLYWITSARVYSVIGYDISANTWKELSVPMAERLEFATLVGRNGVLCLVGGTSGGGNANACVWEMKEWNVWDLTNKVPSELGWKLLGGNKKRNWESTKCVGNDETICLYRELGSGMVVWRKVRDKSGSEWEWNWVGGCDFVKGKKVHNCSIRGILIHPSLASCIF 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0943 374 SUPERFAMILY F-box domain 1 70 IPR036047 GO:0005515
Lele39g0943 374 Pfam F-box domain 2 39 IPR001810 GO:0005515
Lele39g0943 374 Pfam Kelch motif 150 189 IPR006652 GO:0005515
Lele39g0943 374 Gene3D - 52 318 IPR015915 GO:0005515
Lele39g0943 374 PANTHER BNACNNG10540D PROTEIN 1 367 - -
Lele39g0943 374 Gene3D - 2 41 - -
Lele39g0943 374 SUPERFAMILY Kelch motif 60 288 IPR015915 GO:0005515
Lele39g0943 374 SMART kelc_smart 150 201 IPR006652 GO:0005515
Lele39g0943 374 ProSiteProfiles F-box domain profile. 1 33 IPR001810 GO:0005515
Lele39g0943 374 SMART fbox_2 5 45 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0943 Lele-ChrLele39 18326680 18327804 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele39g0943 39 18326680 18327804 Lele39g0943 39 18326680 18327804 ECH
Lele37g0481 37 3958437 3959576 Lele39g0943 39 18326680 18327804 hybridization
Lele38g0449 38 3641596 3644754 Lele39g0943 39 18326680 18327804 hybridization