Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0899 ATGTCTTCTTCGTTGAGATCTTCTTCAGTTTCGGATAAGAACTTCAGGCTAAACTTCGATGAGCTTCGATGGGTGATGGAGATAAAGAAAACCCTAGAGGAAGAGCATGAGGAAGAAGGTGAATACAGTGTGTCGATCTTCAACGTGCCGAGGCTTCTGATGATGTGTGACCCAGATTCGTATGTGCCTCAACAAGTGGCCATAGGACCATACCATTATTGGCGAGCAGAGCTTTATGAGATGCAGAGGTACAAGGTTGCTGCTGCAAAAAGATTCCGACAACATATTCAGAATCATAAGTTGGAAAACCTAGTACATGAGTTGACCAAGTTCGAACCCAGGATTCGAGCAAGCTACCACAAGTACTTGGATTTCAACGGCGAAACGTTGGTGTGGATGATGATAATTGACGCCTCATTCTTGCTTGAATTCCTTCAAGTTTATGCAATCCAAGAAGGAAACAAAATTCCTGGAATTTCCTCCAGAATGTCTCACTTAGTGGATTACGCAGGAAAGAAATCAGCCCACAACGCAATTCTGAGGGACATAGTGATGCTGGAGAATCAAATCCCTTTGTGTGTTTTGCGGAAGATGCTGGAATTCAAATTCTCGTCGCTCGATGATGCAGATCATGTTCTTTCTCTCATCCTAACTGGGTTGTTTAATGAACTTTCTCCGTTCAAAATGATGCAGGATTGTCCAGTTGTTCAGATCTCTGAGTGTGCTCATTTGCTAGATCTCTTCTACGACATGATTGTTCCCAGAACTAAAGATCAACAGCCTGATCTTTCCATTGATATTGATGAGTGTATTGTATCAAAAGGAGGGAAAAATGATGAGGAATCAAGCACGAACACAAGCCATTTGAAGAAATTCCTCAGAGAAGTATGGAAGATTCTTTCAAAGCTAAACGGAGGACCTGTGAGATTAATCAAGAAGGTATTACTTTCTAGACCCTTGAAAGTCTTTGTTAAGTTACCATGGACAATAGTCTCAAACCTACCTGGAATTAAATTCATAAAACAACCTGTTGAATACTTCTTTAACTTCACACAAGAAGAAGAAGAAAAGCCAGGAAATGAGGGTTCTACCTCAAAGAGTTTGATTGAGAAGCCACCATTAATAGAGGAAATCACAGTCCCTTCTGTTACAGAACTAATGAATTCTGGGGTTCGTTTTGTACCCACAACTGGATCTATATCACGCATCAAATTTGATTCAACAACACGCACTTTACACCTTCCAATGGTTGGCCTAGACGTGAACACTGAAGTGTTCTTGAGAAATTTAGTTGCATATGAAGCTTCAGTAGCATCTGGGCCATTGGTTTTGACACGATACACAGAATTAATGAATGGGATTGTGGATTCTGAAGAGGATGCTAAAGTGCTGAGAGAAAAAGGGGTGATTCTGAATCACTTGAAGAGTGATTCAGAAGTGGCTAACTTGTGGAATGGGATGAGTAAGTCTATAAAGCTGACGAAAGTGCCAGTGTTGGATAATGTGGTTGAAGATGTGAACAAGTATTATAATGGAAGATTGAAGGTGAAGGCCCGCAAATTCATGAGGAGTTATATATTTGGGTCGTGGCAGTTATTGACGTTTTTGGGAGCAATTTGTCTCATGCTTTTGATGTTCTTGCAAGCCTTTTGCTCTGTTTATACTTGCAATCGTTACTTTCGAATGGCTACGTCTGACTGA 1701 0.408 MSSSLRSSSVSDKNFRLNFDELRWVMEIKKTLEEEHEEEGEYSVSIFNVPRLLMMCDPDSYVPQQVAIGPYHYWRAELYEMQRYKVAAAKRFRQHIQNHKLENLVHELTKFEPRIRASYHKYLDFNGETLVWMMIIDASFLLEFLQVYAIQEGNKIPGISSRMSHLVDYAGKKSAHNAILRDIVMLENQIPLCVLRKMLEFKFSSLDDADHVLSLILTGLFNELSPFKMMQDCPVVQISECAHLLDLFYDMIVPRTKDQQPDLSIDIDECIVSKGGKNDEESSTNTSHLKKFLREVWKILSKLNGGPVRLIKKVLLSRPLKVFVKLPWTIVSNLPGIKFIKQPVEYFFNFTQEEEEKPGNEGSTSKSLIEKPPLIEEITVPSVTELMNSGVRFVPTTGSISRIKFDSTTRTLHLPMVGLDVNTEVFLRNLVAYEASVASGPLVLTRYTELMNGIVDSEEDAKVLREKGVILNHLKSDSEVANLWNGMSKSIKLTKVPVLDNVVEDVNKYYNGRLKVKARKFMRSYIFGSWQLLTFLGAICLMLLMFLQAFCSVYTCNRYFRMATSD 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0899 566 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 37 553 IPR004158 -
Lele39g0899 566 Pfam Plant protein of unknown function 46 544 IPR004158 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0899 Lele-ChrLele39 17925990 17929020 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele39g0899 39 17925990 17929020 Lele39g0899 39 17925990 17929020 ECH
Lele37g0526 37 4348202 4351053 Lele39g0899 39 17925990 17929020 hybridization
Lele38g0501 38 4097294 4101005 Lele39g0899 39 17925990 17929020 hybridization