Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0883 ATGCTGTGCAGGAAGGGTCTCCGGAACTGCGGATCAGGATCGGTGCCGGTGTACCTCAATGTGTACGATCTGACGCCGATTAACGGATACGCTTACTGGTTCGGCCTCGGAGTCTACCATTCCGGCGTCCAAGTTCATGGAGTGGAGTACGCATTTGGAGCTCACGAGTACTCATCGACGGGGATATTCGAAGGAGAACCAAAACGGTGCGAGGGTTTCGCGTTTAGGAAGACGATTCTGATAGGACAGACGGAGATGGGAGAGGAAGGAGTGAGGGGGGTGATGGAAGAGCTCGCCGGAGAGTACAGAGGGAATGCGTACAATCTGATCACCAAGAATTGCAACCATTTCTGCAACGAAGCGTGCCTGAAACTCACGGGCAAATCTATTCCCAGTTGGATCAATCGTCTAGCTAGAATCGGGTTTCTTTGCAAGTGTGTTCTTCCGGTGGCTATAAACTCAACCAGAGTTAGGCATCACAGAATTGAAGACAAACAATGTGAAGAAGAGAAGAAGGAAGCATCATCATTATCATCGTCAACAACAAGCGTCCCTTTAGGAACATCCGATCAAATACAGATACAAAGATCACCATCAACAAGTGAGACAAATAACAACGGCAAGATGTCACCTTCAAATTCAACATCTTCTCCATCATCGACTTCCCCAGCTTTACGCAGGGGAAGGAGTATAATCAGGCCTGACCTTCCTCCACCTTCTTCGCCTGTGATTATTGAGCCCTCTTCTTCATCTTCATGTCCAGACCCTGAACATTAG 777 0.4839 MLCRKGLRNCGSGSVPVYLNVYDLTPINGYAYWFGLGVYHSGVQVHGVEYAFGAHEYSSTGIFEGEPKRCEGFAFRKTILIGQTEMGEEGVRGVMEELAGEYRGNAYNLITKNCNHFCNEACLKLTGKSIPSWINRLARIGFLCKCVLPVAINSTRVRHHRIEDKQCEEEKKEASSLSSSTTSVPLGTSDQIQIQRSPSTSETNNNGKMSPSNSTSSPSSTSPALRRGRSIIRPDLPPPSSPVIIEPSSSSSCPDPEH 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0883 258 Pfam PPPDE putative peptidase domain 16 149 IPR008580 GO:0008233
Lele39g0883 258 PANTHER DESUMOYLATING ISOPEPTIDASE 14 204 IPR008580 GO:0008233
Lele39g0883 258 MobiDBLite consensus disorder prediction 176 226 - -
Lele39g0883 258 ProSiteProfiles PPPDE domain profile. 15 152 IPR008580 GO:0008233
Lele39g0883 258 SMART DUF862_2a 15 153 IPR008580 GO:0008233
Lele39g0883 258 MobiDBLite consensus disorder prediction 165 258 - -
Lele39g0883 258 Gene3D PPPDE domains 12 176 IPR042266 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0883 Lele-ChrLele39 17775356 17778141 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele39g0883 39 17775356 17778141 Lele39g0883 39 17775356 17778141 ECH
Lele37g0546 37 4488986 4491734 Lele39g0883 39 17775356 17778141 hybridization