Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0856 ATGGCTGCTTCCGTTGCTGGAGTTGTTGGGAGTAGTAGGTCATGTTCTTCCTGGATTCAATTCAAGGACAGTGAAAAGAAACAGAAACGGATGAACAGAGTTAAGATTTCTTGTTCTTCTTCTTCTATAATGGATCCTTATAAGACCTTAAGAATCCAGCCTGGTGCCTCTGAATCTGAGGTTAAGAAAGCTTTTAGACAGCTTGCTTTGCAGTTTCACCCAGACGTTTGCAGAGGAAGCAATTGTGGGGTACAGTTTCACCAAATCAATGAGGCTTATGATATAGTGATGGATAATTTGAGAGGAGTGGCAAATGGAAGTGAAATGTTTGGTAATGATCATGAAGATGGAGGGAATGATGAATCAATGAGAGGAATGAACGATCCAGATTGGGACTTATGGGAAGAGTGGATGGGATGGGAAGGAGCAGGAATCCGCGACTACACATCTCATATCAATCCCTACATTTGA 471 0.4204 MAASVAGVVGSSRSCSSWIQFKDSEKKQKRMNRVKISCSSSSIMDPYKTLRIQPGASESEVKKAFRQLALQFHPDVCRGSNCGVQFHQINEAYDIVMDNLRGVANGSEMFGNDHEDGGNDESMRGMNDPDWDLWEEWMGWEGAGIRDYTSHINPYI 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0856 156 PRINTS DnaJ domain signature 47 65 IPR001623 -
Lele39g0856 156 PRINTS DnaJ domain signature 65 80 IPR001623 -
Lele39g0856 156 PRINTS DnaJ domain signature 81 101 IPR001623 -
Lele39g0856 156 SMART dnaj_3 44 101 IPR001623 -
Lele39g0856 156 Gene3D DnaJ domain 16 103 IPR036869 -
Lele39g0856 156 ProSiteProfiles dnaJ domain profile. 45 111 IPR001623 -
Lele39g0856 156 FunFam chaperone protein dnaJ 8, chloroplastic 19 106 - -
Lele39g0856 156 Pfam DnaJ domain 45 99 IPR001623 -
Lele39g0856 156 CDD DnaJ 45 98 IPR001623 -
Lele39g0856 156 SUPERFAMILY Chaperone J-domain 41 139 IPR036869 -
Lele39g0856 156 PANTHER CO-CHAPERONE PROTEIN DJLA 20 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0856 Lele-ChrLele39 17511554 17512919 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0574 37 4736841 4738189 Lele39g0856 39 17511554 17512919 hybridization