Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0798 ATGGCGGAATCCAATACCGTACACTCGCCTCTCCTGACCTACTTTTCCATGCTATCTCTTCTCTCACTTTGTCCTCCATTCGTTATCCTCCTATGGTATACCATGACACAAGCAGACGGGTCTATTTTACAGACTTGGGATTATTTGAAACTGAACGGGCTGCAAGGATTTCTTAACATATGGCCCAGACCCACTGCTACGGCTTGGAAAATAATTGGCGCGTATGCTGCATTTGAAGCGGCACTTCAACTTCTTCTACCTGGTAAAAGGGTTGAGGGCCCCATATCTCCTACTGGCAACCGACCTGTGTACAAGGCAAATGGTGTGGCAGCATATGTAGTGACATTGATTACTTATCTTGGCCTCTGGTGGTTTGGAATATTCAACCCAACCATTGTGTACGATCACTTGGGGGAGATATATTCAGCACTCATTTTTGGGAGTTTTGTCTTCTGTATTTTCTTGTACTTAAAAGGCCATTTTGCACCATCTTCTACTGATTCTGGTTCATCTGGGAACATAATTATCGATTTTTACTGGGGTATGGAGCTCTATCCACGAATCGGGAAAAATTTTGACATAAAAGTTTTTACAAATTGCCGATTTGGAATGATGTCTTGGGCTGTTCTTGCACTAACCTATTGCATAAAGCAGTATGAGGAAACTGGGAAAGTAGCTGACTCAATGCTTGTAAATACTGCATTAATGCTGGTGTATGTTAGCAAGTTTTTCTGGTGGGAAGCTGGATATTGGAACACAATGGATATTGCTCATGACCGAGCGGGATTTTATATTTGTTGGGGCTGCTTGGTGTGGGTTCCATCTGTTTATACATCTCCTGGAATGTACCTTGTCAACCATCCTGTAAATCTTGGCACTCAGCTTGCAATCTTTATTCTTGTGGCTGGCATTCTCTGCATATACATCAACTATGATTGTGATAGGCAAAGGCAAGAATTTCGTTGGACGAATGGAAAATGCTTAGTCTGGGGAAAACCCCCATCAAAGATAGAGGCCTCCTATACCACCACTACTGGAGAAACAAAAACCAGCCTTCTTTTAACATCTGGGTGGTGGGGTTTAGCTCGTCATTTCCATTATGTCCCAGAAATACTTTCTGCTTTCTTTTGGACAGTTCCTGCTCTATTCAATCATTTTTTGCCTTACTTCTACGTCATATTTCTTACCATCCTTCTCTTTGATCGAGCGAAAAGGGATGATGATCGGTGTAAGTCCAAGTATGGTAAGTACTGGAAACTATATTGCAACAAGGTGCCTAATAAAATCATTCCAGGAATTTACTGA 1305 0.4199 MAESNTVHSPLLTYFSMLSLLSLCPPFVILLWYTMTQADGSILQTWDYLKLNGLQGFLNIWPRPTATAWKIIGAYAAFEAALQLLLPGKRVEGPISPTGNRPVYKANGVAAYVVTLITYLGLWWFGIFNPTIVYDHLGEIYSALIFGSFVFCIFLYLKGHFAPSSTDSGSSGNIIIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLALTYCIKQYEETGKVADSMLVNTALMLVYVSKFFWWEAGYWNTMDIAHDRAGFYICWGCLVWVPSVYTSPGMYLVNHPVNLGTQLAIFILVAGILCIYINYDCDRQRQEFRWTNGKCLVWGKPPSKIEASYTTTTGETKTSLLLTSGWWGLARHFHYVPEILSAFFWTVPALFNHFLPYFYVIFLTILLFDRAKRDDDRCKSKYGKYWKLYCNKVPNKIIPGIY 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0798 434 ProSitePatterns Sterol reductase family signature 2. 398 421 IPR018083 GO:0016628
Lele39g0798 434 ProSitePatterns Sterol reductase family signature 1. 172 187 IPR018083 GO:0016628
Lele39g0798 434 PANTHER DELTA(14)-STEROL REDUCTASE 5 434 - -
Lele39g0798 434 Pfam Ergosterol biosynthesis ERG4/ERG24 family 41 434 IPR001171 GO:0016020|GO:0016126|GO:0016628
Lele39g0798 434 Gene3D - 203 433 - -
Lele39g0798 434 FunFam Putative 7-dehydrocholesterol reductase 224 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0798 Lele-ChrLele39 17019505 17024829 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0798 1 434 Miscellaneous Gene Families AT1G50430 85.023 0.0 766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele39g0798 39 17019505 17024829 Lele39g0798 39 17019505 17024829 ECH
Lele37g0628 37 5251427 5256768 Lele39g0798 39 17019505 17024829 hybridization