Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0540 ATGCTATCGAGTAGATTTTCCTTTTTAGGTGGTCGCGATTCGGGTAGGGAAGATCATTCCCCGAAGGTCGAACTCGTTCCTACATTGAAACTTGAAGCAGATAAAGAAGTGTATCGTCCTGGTGATCCAGTTTTAATCACCGTCGAGATCTCCAATCCATCTAGTTCGTATTCATTTTTAGTGGAAAGACTGAGTTTTGAGATTAAAGGCATTGAGAAATTGGATGTTCAATGGTTCGCCACACTGAAACCATTGCCAGGTTCAAAGCATAAGAGAGGGGAATATGTGTTTTTAGACGGCTCAACGACTGCCATGGTTGCAAATCTGATCGTTTCTGCTGGCACAAGCAAATCGTATGTTGTGCGAACACTTCTGCCTAGAATTATTCCACCATCTTACAAAGGTTCAACTGTTCGCTATTTTTACTATGTTAAAAGTTCATTAATTGGAGAGTGGCTAGTGCTGGAAAATGGGCAATCATTTGCAGAGTCTGTACAAGATGTTACTAATATGGAAGTGCGTATTCCATTACAAGTATGGGTGAACCAGAAAAGCAGTGGCTTACTGATGGAAGAAGAACTCGTTCCCTCAACTACTGCCCAAATGGATATATATTGGAAAGTGATGGATGGAGATGCTGATTGGGTTAGAGCAAATGATATTAATGATGCTTCAGAGGAAGGATATGACAGCTCAAGGGATGAAGCTTCCTCTGTTTCCTCATATAACCCTGTGAAAGATAATCTGCACAGAAGCTTTGGAAGTTCACTATCATTGCGTTCTTCTTCTGCAAGATCTTTAAGCAGGGATCCTTTGGAAGGTTCTCGGATGAGTTTATCTTCACAAATGGCACTTCCTCGACTCTCTGTGGCTGAGGTTTTACATGATTCTTCTGCTGGTCCCCAACAGAAGTTAAGAAATCCGTTTTCTGCTGAAGATGATGCAGGTGTTTCCTCTTCACCAGAAGCAGTGGCCATCAACTCTGCTTCATCAGAAGGCTTCATTAGAGGAAGGTCATATAACATCAAGCTGGACGACCAAGTTCTGCTTAAATTTTCCCCAAAAAATTCTGACTCCAATTATTACTTCAGTGACATGATAGGTGGGACTCTAACTTTCTTTCATGAAGAGGGAGCTAGAAGATGCCTTGAGATCTCAATAACACTGGAAACTTCAGAAACTATAAATCGGAGATTCGTCCACCCATCTAGAAAGCATTCCCCTACAATCACAAAGGTCCAGAGTGACCATTATGAAGTTGTTGCAGATTTGGTGCAGACAAGTTTTCTTTTCTCTATCCCTATGGATGGTCCAATGTCGTTCTCCACTCCTCGTGTGTCTGTGCAATGGATTCTTAGATTTGAATTTTATGCCACTCCAAAGAATTTGGATTCGACCAAGTATGAACATCCTCTTCTGATTGAGGGGAGAGAAAAATGTGAATGGGTTCTTCCGATTACTGTGCACGCTCCTCCACCTAGGACTTCTGGGACAAGAAGCGAGAAGCCTGTCTCTCTGGATCCCATGTGGGTGCATGATTAA 1542 0.4222 MLSSRFSFLGGRDSGREDHSPKVELVPTLKLEADKEVYRPGDPVLITVEISNPSSSYSFLVERLSFEIKGIEKLDVQWFATLKPLPGSKHKRGEYVFLDGSTTAMVANLIVSAGTSKSYVVRTLLPRIIPPSYKGSTVRYFYYVKSSLIGEWLVLENGQSFAESVQDVTNMEVRIPLQVWVNQKSSGLLMEEELVPSTTAQMDIYWKVMDGDADWVRANDINDASEEGYDSSRDEASSVSSYNPVKDNLHRSFGSSLSLRSSSARSLSRDPLEGSRMSLSSQMALPRLSVAEVLHDSSAGPQQKLRNPFSAEDDAGVSSSPEAVAINSASSEGFIRGRSYNIKLDDQVLLKFSPKNSDSNYYFSDMIGGTLTFFHEEGARRCLEISITLETSETINRRFVHPSRKHSPTITKVQSDHYEVVADLVQTSFLFSIPMDGPMSFSTPRVSVQWILRFEFYATPKNLDSTKYEHPLLIEGREKCEWVLPITVHAPPPRTSGTRSEKPVSLDPMWVHD 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0540 513 MobiDBLite consensus disorder prediction 1 21 - -
Lele39g0540 513 Pfam Rgp1 107 456 IPR014848 -
Lele39g0540 513 SUPERFAMILY E set domains 28 152 IPR014756 -
Lele39g0540 513 MobiDBLite consensus disorder prediction 491 513 - -
Lele39g0540 513 MobiDBLite consensus disorder prediction 296 317 - -
Lele39g0540 513 PANTHER REDUCED GROWTH PHENOTYPE 1 RGP1, YEAST -RELATED 27 496 IPR014848 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0540 Lele-ChrLele39 4737991 4746773 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0805 38 19737901 19746467 Lele39g0540 39 4737991 4746773 hybridization