Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0538 ATGGAGAGCTTGATTGGGTTGGTGAACCGTATCCAGAGGGCTTGTACTGTGCTTGGTGACTATGGAGGTGGTGACAACACGTTTTCTTCTCTCTGGGAAGCTCTTCCTTCCGTTGCTGTCGTCGGTGGTCAGAGTTCCGGGAAGTCTTCCGTTTTGGAGAGTATTGTTGGTCGTGACTTCCTTCCCAGGGGGTCAGGGATTGTAACGAGACGTCCTTTGGTGCTGCAGCTTCATAAGACGGAAGAAGGATCGCAAGAATATGCCGAATTCCTTCACTTGCCAAGGAGAAAGTTCTCTGACTTTGCCCTGGTTCGTCAGGAAATTCAGGATGAAACTGACAGAGTCACTGGAAAGAACAAACAAATATCTCCCATTCCAATTCATCTTAGCATCTATTCTCCAAATGTTGTCAACCTAACCTTGATTGATTTACCGGGTTTGACCAAAGTTGCTGTAGAAGGACAGCCTGAGACTATTGTTCAAGACATTGAAATGATGGTTCGATCTTATATTGGGAAGCCTAATTGCATTATACTAGCAATATCTCCAGCCAATCAAGACATAGCAACTTCTGATGCTATTAAAATTTCCAGGGAAGTGGATCCCACAGGTGAACGGACATTTGGGGTGTTGACAAAATTGGATCTGATGGATAAAGGAACAAATGCATTGGATGTCCTAGAAGGAAGATCTTACCGCTTGCAACATCCTTGGGTTGGTATTGTGAATCGATCCCAAGCAGATATCAATAAAAATGTTGATATGCTTGCTGCTAGACACAAGGAGCGTGAGTACTTTGCCTCCAGTGCTGACTATGGGCACTTAGCCAACAAGATGGGTTCGGAGTATCTTGCAAAACTCCTATCACAGCACTTGGAGTCAGTAATCAGGGCACGGATACCTAGTATAACATCTTTGATAAACAAAAGCATTGATGAACTTGAATCAGAGATGGATTATCTTGGGAGACCTATTGCACTTGATGCTGGGGCTCAATTATACACCATACTGGAAATGTGCCGAGCATTTGATCGGATATTCAAGGAGCATTTAGACGGAGGGCGACCAGGAGGAGATAGGATATATAATGTCTTCGACAATCAACTGCCTGCTGCTTTACGGAAGCTCCCATTTGACCGGCATCTTTCTATTCAGAATGTTAGGAGGGTGGTATCAGAGGCTGATGGTTATCAGCCTCACTTAATTGCCCCGGAGCAAGGTTATCGGCGCTTGATCGAGGGGTCTCTTAATTACTTTAGAGGCCCAGCTGAAGCTTCAGTTGATGCTGTTCACTTTGTGTTGAAAGAACTTGTGAGAAAATCAATAGCTGAATGTCAGGAACTTAAGCGTTTTCCATCTCTTCAAGCTGAAATAGCTGCAGCTGCGAATGAGGCTTTAGAAAGATTCCGTGAAGAGGGTAAGAAGTGTACCATTCGGCTTGTGGACATGGAAGCTTCTTACCTGACCGTGGATTTCTTCCGGAGACTTCCACAAGAAATCGAGCAAACTGGAGCTGGAAATGCTGCTGCTACCGCTACTGCTGCACCAGCTGTGGATCGTTATTCAGAGGGCCACTTCAGGAGGATTGCATCAAACGTGTCATCCTACATAGGTTTGGTGGCAGATACCCTCAGGAACACCATTCCTAAGGCTGTTGTTTATTGTCAGGTCAGAGAAGCAAAACATTCCTTGCTAAACCATTTCTACATACAAATAGGGAAGAAAGAGGGTAAGCAGTTATCACAATTGTTAGATGAAGACCCTGCATTAATGGAGAGGAGGCTACAATGTTCAAAAAGGCTTGAACTGTACAAAGCAGCAAGGGATGAAATTGATTCTGTCTCGTGGGCACGATGA 1857 0.4475 MESLIGLVNRIQRACTVLGDYGGGDNTFSSLWEALPSVAVVGGQSSGKSSVLESIVGRDFLPRGSGIVTRRPLVLQLHKTEEGSQEYAEFLHLPRRKFSDFALVRQEIQDETDRVTGKNKQISPIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPETIVQDIEMMVRSYIGKPNCIILAISPANQDIATSDAIKISREVDPTGERTFGVLTKLDLMDKGTNALDVLEGRSYRLQHPWVGIVNRSQADINKNVDMLAARHKEREYFASSADYGHLANKMGSEYLAKLLSQHLESVIRARIPSITSLINKSIDELESEMDYLGRPIALDAGAQLYTILEMCRAFDRIFKEHLDGGRPGGDRIYNVFDNQLPAALRKLPFDRHLSIQNVRRVVSEADGYQPHLIAPEQGYRRLIEGSLNYFRGPAEASVDAVHFVLKELVRKSIAECQELKRFPSLQAEIAAAANEALERFREEGKKCTIRLVDMEASYLTVDFFRRLPQEIEQTGAGNAAATATAAPAVDRYSEGHFRRIASNVSSYIGLVADTLRNTIPKAVVYCQVREAKHSLLNHFYIQIGKKEGKQLSQLLDEDPALMERRLQCSKRLELYKAARDEIDSVSWAR 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0538 618 Pfam Dynamin family 38 213 IPR045063 -
Lele39g0538 618 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 32 301 IPR030381 GO:0005525
Lele39g0538 618 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 61 70 IPR019762 -
Lele39g0538 618 CDD DLP_1 35 301 IPR001401 GO:0003924|GO:0005525
Lele39g0538 618 Pfam Dynamin central region 222 489 IPR000375 -
Lele39g0538 618 ProSiteProfiles GED domain profile. 526 618 IPR020850 -
Lele39g0538 618 SMART dynamin_3 1 252 IPR001401 GO:0003924|GO:0005525
Lele39g0538 618 Gene3D - 1 310 IPR027417 -
Lele39g0538 618 PANTHER DYNAMIN 2 614 IPR022812 -
Lele39g0538 618 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 26 309 IPR027417 -
Lele39g0538 618 Gene3D Dynamin, middle domain 327 585 - -
Lele39g0538 618 FunFam dynamin-related protein 1E 1 310 - -
Lele39g0538 618 FunFam Dynamin-related protein 1C 332 594 - -
Lele39g0538 618 PRINTS Dynamin signature 60 77 IPR022812 -
Lele39g0538 618 PRINTS Dynamin signature 183 201 IPR022812 -
Lele39g0538 618 PRINTS Dynamin signature 35 53 IPR022812 -
Lele39g0538 618 PRINTS Dynamin signature 133 150 IPR022812 -
Lele39g0538 618 PRINTS Dynamin signature 202 218 IPR022812 -
Lele39g0538 618 PRINTS Dynamin signature 225 244 IPR022812 -
Lele39g0538 618 SMART GED_2 521 614 IPR003130 GO:0003924|GO:0005525
Lele39g0538 618 Pfam Dynamin GTPase effector domain 522 614 IPR003130 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0538 Lele-ChrLele39 4696182 4701550 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele39g0538 39 4696182 4701550 Lele39g0538 39 4696182 4701550 ECH
Lele37g0874 37 18540359 18545774 Lele39g0538 39 4696182 4701550 hybridization