Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0531 ATGGCTACCCCTCCCTCCTCATCATCTTCCTCCTCCTCCTCCTCAAGATCCACCATGTTCTACTATGGCGATTTCGAGGATCACTTCGACGAGCCCTACTTCCTCGAAGCTTGCTTTCTCTGCCGGAGACCCCTCGGTCTTAATAGGGACATCTTCATGTATAGAGGGAACACACCGTTCTGTAGCAAAGAGTGCAGACAAGAACAGATAGAAATCGATGAGTCGAATGAGAAAAGCTGGAAGGTTTCGTCGAAAAGAGGTGTGAGACAATCTGAGTCGAATCAGAAGTCCACACCGAGTAAGGCTGTAAGAACTGGGACTGTTGCCGTGGCCTGA 336 0.497 MATPPSSSSSSSSSSRSTMFYYGDFEDHFDEPYFLEACFLCRRPLGLNRDIFMYRGNTPFCSKECRQEQIEIDESNEKSWKVSSKRGVRQSESNQKSTPSKAVRTGTVAVA 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0531 111 MobiDBLite consensus disorder prediction 86 104 - -
Lele39g0531 111 Pfam zinc-finger of the FCS-type, C2-C2 26 75 IPR007650 -
Lele39g0531 111 PANTHER FCS-LIKE ZINC FINGER 1-RELATED 16 111 IPR044533 -
Lele39g0531 111 ProSiteProfiles Zinc finger FLZ-type profile. 33 77 IPR007650 -
Lele39g0531 111 MobiDBLite consensus disorder prediction 76 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0531 Lele-ChrLele39 4606793 4607348 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele39g0531 39 4606793 4607348 Lele39g0531 39 4606793 4607348 ECH
Lele37g0880 37 18617058 18617609 Lele39g0531 39 4606793 4607348 hybridization
Lele38g0813 38 19832145 19832700 Lele39g0531 39 4606793 4607348 hybridization