Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0319 ATGTCTCGACCCCCAAACCGCGAGTTTCAGGAATGGTGGAACAAGCAGCGAGCTACGGGCCATGATCTTCTTGACGACAAATCCGACGGTTCTACTCGCTCTTTTCTCACCGTCGACATACAAACGGTTCCTTCCGATGGAGAGCCGGTGGAGAAGGAGCGTGTCCGTAGTGCCCGCCAGCTTTCCTGGCTTTGCCTTTTGAGATTCCAGCAAATCGCGAGCTCCCTTGCTTGGCTGTCCAATGGCTTTCTCTCATTGCTCCGAACCGCCAATCGCAGGATTGCTTCACCGGATTCGCTTTCCGATTCTAAGTCTTCCAGGCTTTATCGCGTAATCAAGGTGTTCTTGATTGTCGTTCTCCTTTTGCTTGTGTTTGAGCTTGTTGCATACTTCAAAGGATGGCATTTCCGCCCGCCGACGGCCCATGCCGACGTTTATGGAATGATTGGTCTTGTTTATGCGAAATGGCTTGAGATTCGAGCAGATTATTTGGCGCCGCCGTTGCAGAGCTTAACCAATATGTGCATTGTGCTCTTCTTGGTACAGTCGATTGATAGAGTGATTTTGATCTTGGGATGTTGCTGGATCAAATTCCGGCGTTTGAAACCAGTGGCCTCCATGGAGTATCCAACAAATGCTAAGAATGAGGATGTGAATGTCCAGGATTATCCAATGGTGTTAGTTCAGATTCCCATGTGCAATGAGAGGGAGGTCTATCAGCAATCTATTGCTGCAGTTTGTGTCCTGGATTGGCCAAAGGATAGAATGCTTGTACAGGTCCTTGATGATTCTGATGAAGTAGACATCCAACATCTTATCATGGCGGAAGTGCAGAAATGGCAACAGAGGGGTGTGCGAATACTATATAGACATCGTCTGATACGTACAGGCTATAAGGCAGGGAATCTCAAATCAGCAATGAATTGTGATTATGTTAAAGAATATGAGTTTGTGGCAATATTTGATGCTGATTTTCAGCCAGCACCAGATTTCTTAAAAAGGACAATACCTCATTTTAAGGGGAGAGATGATTTGGCATTGGTCCAGACACGATGGGCTTTTGTAAACAAGGATGAGAACTTGCTTACAAGACTGCAGAACATAAACTTATCTTTCCATTTTGAGGTTGAGCAACAGGTCAATGGCGTGTTCATTAACTTTTTTGGTTTCAATGGAACTGCCGGCGTGTGGAGGATAAAGGCTCTTGAGGAGAGTGGTGGTTGGTTGGAACGAACTACTGTTGAGGACATGGATATTGCTGTTCGAGCTCATCTCTGTGGGTGGAAGTTTATCTTTCTAAATGACGTGAAGTGCCTTTGTGAACTTCCTGAGACCTATGAGGCATATAAGAAACAGCAACACCGCTGGCATTCTGGTCCAATGCAATTGTTTCGTTTGTGTTTTGTTGATATACTTCGTTCAAAGGTGAGTTGGGTCAAGAAGGCCAACTTAATATTCCTCTTCTTTCTCCTAAGGAAGCTTATCCTGCCATTTTATTCATTCACCCTCTTTTGCATCATTCTCCCATTGACCATGTTCCTTCCGGAAGCTGAGCTGCCGACCTGGGTTGTTTGTTACGTTCCTGGAGTCATGTCTATCCTAAGTATTCTCCCATGTCTCCATTCATTTCCATTCATAGTGCCTTACCTCCTATTTGAGAATACTATGTCGGTGACTAAGTTTAATGCTATGATATCGGGATTATTTCGTTTTGGAAGTTCTTATGAGTGGGTGGTTACAAAAAAATTGGGAAGATCATCAGAGACAGATCTGGTTGCTTTTGAGAAGGAATCTGAGCCTCTAATGAGATCTACCAGTCTTCACAGATCATCTTCAGATTCAGGCATTGAGGAGCTAAGCAAACTAGAATTGTCAAAGAAAACGGGGGGGAAAAGTAAGAAAAATCGTTTGTACAGGAAAGAACTTGCTCTTGCATTCATATTATTAACTGCCTCAGTTAGAAGCTTATTATCAGCTCAAGGAGTTCACTTCTACTTCCTGTTATTTCAAGGAATCAGTTTTCTGGTAATTGGTCTTGATTTGATTGGAGAACAAGTCAGTTGA 2064 0.438 MSRPPNREFQEWWNKQRATGHDLLDDKSDGSTRSFLTVDIQTVPSDGEPVEKERVRSARQLSWLCLLRFQQIASSLAWLSNGFLSLLRTANRRIASPDSLSDSKSSRLYRVIKVFLIVVLLLLVFELVAYFKGWHFRPPTAHADVYGMIGLVYAKWLEIRADYLAPPLQSLTNMCIVLFLVQSIDRVILILGCCWIKFRRLKPVASMEYPTNAKNEDVNVQDYPMVLVQIPMCNEREVYQQSIAAVCVLDWPKDRMLVQVLDDSDEVDIQHLIMAEVQKWQQRGVRILYRHRLIRTGYKAGNLKSAMNCDYVKEYEFVAIFDADFQPAPDFLKRTIPHFKGRDDLALVQTRWAFVNKDENLLTRLQNINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLCGWKFIFLNDVKCLCELPETYEAYKKQQHRWHSGPMQLFRLCFVDILRSKVSWVKKANLIFLFFLLRKLILPFYSFTLFCIILPLTMFLPEAELPTWVVCYVPGVMSILSILPCLHSFPFIVPYLLFENTMSVTKFNAMISGLFRFGSSYEWVVTKKLGRSSETDLVAFEKESEPLMRSTSLHRSSSDSGIEELSKLELSKKTGGKSKKNRLYRKELALAFILLTASVRSLLSAQGVHFYFLLFQGISFLVIGLDLIGEQVS 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0319 687 Pfam Glycosyl transferase family group 2 318 514 IPR001173 -
Lele39g0319 687 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 152 684 - -
Lele39g0319 687 FunFam probable xyloglucan glycosyltransferase 5 216 442 - -
Lele39g0319 687 SUPERFAMILY Nucleotide-diphospho-sugar transferases 223 504 IPR029044 -
Lele39g0319 687 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 214 441 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0319 Lele-ChrLele39 2212318 2218133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0319 1 687 Miscellaneous Gene Families AT3G07330 76.343 0.0 1074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g1094 37 20652995 20658697 Lele39g0319 39 2212318 2218133 hybridization
Lele38g0974 38 21344542 21345204 Lele39g0319 39 2212318 2218133 hybridization