Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0043 ATGGACTTGAAGCTAATGCTTAAAGTGCAAGTTTGTGTTCGGCTTCAATGCCAGCCACTGTCTGAAGATGCATTCAGGCAAGTCATTGCTGACAATTACTACAATAGCACTCACTTCTGGTTTGAGCTTGACCATGGACAAACTAGAAAGCTTACTTCTTTACTAGCATCTTCAGCAATTGGCCTGGGATATCCAGTAATTGGATTCTCATACAATGTGCTAGACACTCCTGATGTGAATAACATGAACTCTGCAGAGAAGGGCTGTCTGGAGGCATTAACTTGTTTGGAGAAGGAGGAAGAGTGTCCTAGTCCTCCATTTGAGTATCAGAACATCATAGCCCAGGTGGAGGCAGAATTGGAAATTAACCGTCTAAAAGATCGCTGTACAATATTAGAATCTGCATGTAATCTTTCTCTGGAGCATGATGAAAAGAATGTCCTTCAGTCTTCTGATCAGCAGCATCTAGACCTTAAAGAGTCAGTGTATTTCATTGGAGGCTACAATGGAGAATCATTCTTAGCATCTGTGGATTTGTATTGCCCTTCCCCGAACGTGATAAAATCTCTAAGGCCTATGAGCTCAGTTCGGTCTTATGCTTCAACTGTGCAGCTGAATGGGGAGCTTTATGTGTTTGGTGGTGGAAATGGTTGTATTTGGTATGACACAGTCGAGTCATACAGTCCAATTTGTGATAAGTGGACTCTGTGGCCATCTTTTAATCAGAAGAAAGGAAGCCTTGCTGGAGCTGGTTTAAGCAAGAAAATAGTCGCCATTGGTGGAGGATATGGAATTGACTGTTATTCAGAGGTTGAGATGCTTGATTTAGACATAGGAAGATGGATCTATATTCGTTCAATGCTTGAGAAGCTAACTTGGATGTATGCTCTTGGTGGCTTTGATGGAGATGCAATGGTTCCAAGTGTTGAGGTTTTTTATCCCCGACTTGAGACAGGGATGATGGGGGAGCCCATGAATCATCCTAGAAGTATTCTGCTGCCGCAGTTGTTGAGGATTATAAGGAAGGTCAGGGATGGCAAGAAATTTGCACAACAGCCGTTGGCAAAAGGTGCTCCTTTTTTCCTCATCAGGTAG 1095 0.4292 MDLKLMLKVQVCVRLQCQPLSEDAFRQVIADNYYNSTHFWFELDHGQTRKLTSLLASSAIGLGYPVIGFSYNVLDTPDVNNMNSAEKGCLEALTCLEKEEECPSPPFEYQNIIAQVEAELEINRLKDRCTILESACNLSLEHDEKNVLQSSDQQHLDLKESVYFIGGYNGESFLASVDLYCPSPNVIKSLRPMSSVRSYASTVQLNGELYVFGGGNGCIWYDTVESYSPICDKWTLWPSFNQKKGSLAGAGLSKKIVAIGGGYGIDCYSEVEMLDLDIGRWIYIRSMLEKLTWMYALGGFDGDAMVPSVEVFYPRLETGMMGEPMNHPRSILLPQLLRIIRKVRDGKKFAQQPLAKGAPFFLIR 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0043 364 SMART kelc_smart 208 254 IPR006652 GO:0005515
Lele39g0043 364 SMART kelc_smart 161 207 IPR006652 GO:0005515
Lele39g0043 364 ProSiteProfiles DCD domain profile. 1 57 IPR013989 -
Lele39g0043 364 Coils Coil 115 135 - -
Lele39g0043 364 Pfam Development and cell death domain 8 54 IPR013989 -
Lele39g0043 364 Pfam Kelch motif 197 236 IPR006652 GO:0005515
Lele39g0043 364 SUPERFAMILY Kelch motif 160 330 IPR015915 GO:0005515
Lele39g0043 364 SMART dcd 1 57 IPR013989 -
Lele39g0043 364 Gene3D - 148 333 IPR015915 GO:0005515
Lele39g0043 364 PANTHER - 9 79 IPR044832 GO:0034976
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0043 Lele-ChrLele39 319621 326348 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g1381 37 22608915 22609495 Lele39g0043 39 319621 326348 hybridization
Lele38g1257 38 23375159 23382521 Lele39g0043 39 319621 326348 hybridization