Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g1248 ATGCCCCCTAAATCTTCTGTTCTCCTTCACAGAATCAGCCACCCTACCGCCGCCTTCCCCCACCGCCTCCTTCGGGACGATCCTATCGCCGCTTCTTCCACCGCCACCATACCCGACCAGGTTGCCCCCTACCACACCCACGCCGTTTCTCCCAACCAGTGCTGCTCCGCCGTCACCCAGAACATCACCGCCGCGGTTCCCACCGTCTGGTCCGTCGTTCGCCGCTTCGATAACCCCCAGGCCTACAAAAACTTCGTCAAGAGCTGCCACGTCCTCGTCGGCGATGGCGACGTGGGCACCCTCCGAGAAGTCCACGTCATATCTGGCCTTCCCGCCGCTAACAGCACGGAGCGACTCGAGATCCTCGACGACGAGCGACATGTTCTAAGCTTCAGCGTCGTCGGCGGGGACCACAGGCTCTCCAACTACCGCTCCGTGACGACGCTTCACCCAGCTGGAGACGGCGAGGGCACCGTGGTGGTGGAATCGTACGTGGTGGACGTGCCGCAGGGGAACACGAAGGAGGACACTTGCGTGTTCGTGGACACGATCGTCCGGTGCAACCTGCAGTCTCTGGCGCAAAAGGCCGAGGACTTAGCCAGACGAAACCACATCGACGATTAG 624 0.6202 MPPKSSVLLHRISHPTAAFPHRLLRDDPIAASSTATIPDQVAPYHTHAVSPNQCCSAVTQNITAAVPTVWSVVRRFDNPQAYKNFVKSCHVLVGDGDVGTLREVHVISGLPAANSTERLEILDDERHVLSFSVVGGDHRLSNYRSVTTLHPAGDGEGTVVVESYVVDVPQGNTKEDTCVFVDTIVRCNLQSLAQKAEDLARRNHIDD 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g1248 207 CDD PYR_PYL_RCAR_like 54 197 - -
Lele38g1248 207 Pfam Polyketide cyclase / dehydrase and lipid transport 55 197 IPR019587 -
Lele38g1248 207 Gene3D - 16 206 IPR023393 -
Lele38g1248 207 FunFam Abscisic acid receptor PYL4 20 207 - -
Lele38g1248 207 PANTHER - 52 195 - -
Lele38g1248 207 SUPERFAMILY Bet v1-like 54 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g1248 Lele-ChrLele38 23326039 23326662 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g1248 38 23326039 23326662 Lele39g0050 39 366654 367277 hybridization
Lele38g1248 38 23326039 23326662 Lele40g1191 40 21826496 21827275 hybridization