Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0770 ATGAACATTGATCATCAGTACTTGGTATTGGCCCCATTTATTGCCCACAACATTTATTCTGTGGCGTTTAATGGTTATGTACAAGACCCAACTTCCTATTTGGGACTCCTAATTGTTTTGGCGAGAATGCTTCATAACCAAATATGGATTTCTGTTTCTCGTTATCGAATTGCCAAGGGCAATAACAGGATCGTTGATAAAGGCCTTGAATTCGATCAAGTTGACAGAGAAAGCAACTGGGATGACCAGATTTTGCTGAATGGACTCTTGTCCTACATATTGTACACGACATTTCCTCAGGCTTCTCGCATACCCTTATGGAGAACAGATGGTGTGGTTATCACAGCTTTATTGCATATTGGTCCTGTGGAGTTTCTTTATTATTGGCTTCACAGAGCTCTTCATCACCATTTTCTCTATTCTCGCTATCATTCTCACCATCATTCTTCTATTGTCACTCAGCCTATAACTGCTGTCATTCATCCGTTTGCTGAAATCCTAGCATATTTTGTTCTATTTTCAATACCACTAATGACGATATTGTTCACAAAAACAATCTCTATTGCCTCCGTTGTTGGTTACCTATTTTACATCGATTTTATGAACAATTTGGGTCATTGCAACTTTGAGTTCTTCCCAAAGATGCTCTTCTCTATCTTTCCCTTGTTGAAGTATCTCTGCTACACGCCATCGTTTCATTCACTGCATCACACGAAATTCAGGAAAAATTACAGCCTTTTCATGCCCTTATATGATTACATTTATGGCACAGTAGATGAATCGACAGATGATACTTATGAAACATCATTGAATAGACCAAGAGATTCTCCAGATGTCGTTCACTTAACTCATTTAACAACTTCAGATTCTATCTATCATCTCCCATTAGGGTTTGCTTCCTTGGCCTCAAACCCTCAAACACCAAAATGGTATCTTTGTTTGATGTGGCCCTTCACATTTGTTTTTAAGCTAATGTCTTGGATCTATTGTCATACCTTCGTCTCAGAAAGCAACACTTTCGAAAAGCTCAATTTGCAATCATGGATCGTACCACGATTTACAAAACAGTATCTCTCAAACAGGCACAACAAAAGACTGAACACGATAATAGAAGATGCGCTTCTTGAGGCTGACTCATTGGGCGTTAAAGTGCTTAGTCTAGGACTTCTGAATCAGAAAGAAGATCTTAACGACTATGGCCAATTATATATTCATAAGTTTCCAAAACTAAAGGTGAAGATTGTAGATGGAAGTAGCTTAGCTTCTGCTATTGTTGTGAACAGCATTTCCAAAGGGACGAAGCAGGTTCTTCTACGAGGAAACTTTGATAAGGTTTCTTTTGCTATAGCCAACTCTTTGTGTGAAGAAAATGTTCAGGTGAGTACGTTATATGAAAATGAGTTAACGAAGCTTCATCTGGGACTCAACACAAAACCTAAAGAAAGCTTTGCACTTTCAACAGCTTCTTATGAGAAGATATGGTTGGTGGGAGATGGATGGGATGAAGATGAACAAATGAATGCACCAAAAGGAACATTATTCATTCCATTTTCTCAGTTCCCTCCAAAGAAAATGCGAAAAGATTGCTTCTACCACTATACTCCTGCAATGTTGGCTCCTTCTTCAATCACAAATATGCATTGTTGTGAGAATTGGCTGCCAAGAAGAGTAATGAGTGCTTGGCGCGTCGCAGGAATAGTACATGCCTTAGAAGGATGGAACGTACATGAGTGTGGCTCTTCCACTTTTAGTCACCTTCAAATTTGGGATGCCACTATTCGTCATGGTTTCCAACCTTTGGTCGCTCCTCTTCCATCAAAAAGCTGGTAA 1830 0.3923 MNIDHQYLVLAPFIAHNIYSVAFNGYVQDPTSYLGLLIVLARMLHNQIWISVSRYRIAKGNNRIVDKGLEFDQVDRESNWDDQILLNGLLSYILYTTFPQASRIPLWRTDGVVITALLHIGPVEFLYYWLHRALHHHFLYSRYHSHHHSSIVTQPITAVIHPFAEILAYFVLFSIPLMTILFTKTISIASVVGYLFYIDFMNNLGHCNFEFFPKMLFSIFPLLKYLCYTPSFHSLHHTKFRKNYSLFMPLYDYIYGTVDESTDDTYETSLNRPRDSPDVVHLTHLTTSDSIYHLPLGFASLASNPQTPKWYLCLMWPFTFVFKLMSWIYCHTFVSESNTFEKLNLQSWIVPRFTKQYLSNRHNKRLNTIIEDALLEADSLGVKVLSLGLLNQKEDLNDYGQLYIHKFPKLKVKIVDGSSLASAIVVNSISKGTKQVLLRGNFDKVSFAIANSLCEENVQVSTLYENELTKLHLGLNTKPKESFALSTASYEKIWLVGDGWDEDEQMNAPKGTLFIPFSQFPPKKMRKDCFYHYTPAMLAPSSITNMHCCENWLPRRVMSAWRVAGIVHALEGWNVHECGSSTFSHLQIWDATIRHGFQPLVAPLPSKSW 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0770 609 PANTHER STEROL DESATURASE 9 599 - -
Lele38g0770 609 Pfam Fatty acid hydroxylase 120 257 IPR006694 GO:0005506|GO:0008610|GO:0016491
Lele38g0770 609 Pfam WAX2 C-terminal domain 436 599 IPR021940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0770 Lele-ChrLele38 19178380 19184575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0770 6 600 Lipid Metabolism Gene Families AT1G02190 55.611 0.0 669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0770 38 19178380 19184575 Lele38g0770 38 19178380 19184575 ECH
Lele38g0770 38 19178380 19184575 Lele40g0711 40 17052386 17060697 hybridization