Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0651 ATGGGCTTGATTTCTGGGCTCTTTATGGGGATAGCACTTGGCATCGCTTTGATGTATGGATGGCAATATATGATTAAGTACCGAAGCGCCAAGCGGATTGCGAAGGCAGTTGATGTCAAACTCCTTGGATCCCTTGACAGAGATGATATAAGAAAGATCTGTGGTGATAATACTCCTGAGTGGATATCTTTTCCTGTATATGAACAGGTGAAATGGCTAAACAAGCAACTGAGCAAACTGTGGCCATCTGTGGCAGAAGCTGGATCAATGGTGATCAAAGAATCTGTTGAACCACTACTTGAGGAGTACAGACCTCCTGGAATTACTTCGTTGAAATTCAGTAAGCTATCGCTTGGAAATGTCGCTCCAAAGATTGAAGGTATTCGTGTTCAGAGTCTTAAGAAAGGCCAAATCATAATGGACATTGATTTCCGATGGGGAGGTGATCCCAGCATTATTTTGGCTGTTGAAGCGGCAGTTGTTGCATCAATCCCTATTCAGTTGAAAGATCTCCAAGTTTTCACGATTGTCCGTGTTATCTTCCAACTTGCTGAAGAGATACCCTGTATTTCTGCTGTTGTTGTTGCCCTACTTGCTGAGCCAAAACCTCGGATTGATTACACTCTTAAGGCCATTGGAGGGAGTTTGACGGCAATTCCTGGATTATCAGATATGATTGATGATACTGTGAACTCAATAGTTACTGATATGCTCCAATGGCCTCATAGGATCGTTGTTCCAATTGGTGGTGTACCTGTTGATACTAGTGAACTGGAGCTTAAACCTCAGGGGAATCTCACAGTGAATGTTGTGAAAGCCAATGATTTGAAGAATATGGAAATGATTGGGAAATCTGATCCTTATGTAGTTGTGCATATTCGACCTTTATTTAAGGTTAAAACCAAGGTTGTTGACAACAACCTGAATCCTGTTTGGGATCAGATGTTTAACTTGATCGTTGAAGACAAGGAGACCCAGTCGCTCACTCTAGAGGTTTTTGATAAAGATATTGGGCAAGATAAGAGATTGGGAATAGTAAAGTTACCCCTTATTGATCTCGAACCAGAAACTGAAAAGGAAATTGAGTTGAGGCTGCTGCCATCACTGGACACACTGAAGGTAAAAGATAAGAAGGACCGAGGATCACTGACAATTAAGGTCTTATACCATCAATATAATAAAGAAGAGCAGTTGGTGGCTCTAGAAGCTGAGAAGAAGATACTAGAAGAAAGGAAGAAACTGAAAGAGGCAGGAGTTATAGGAAGCACCATGGATGCTATAGATGGAGCTGCATCACTCGTTGGTTCTGGGGTAGGAATGGTTGGTACTGGTGTTCTTGCTGGTGCTGGTCTTGTTGGAAGTGGCATTGGTGCTGGAGCCGGACTGGTTGGCAGTGGTGTTGGTGCTGGGGTGGGGTTTGTAGGTAGCGGTCTTGGAGCCGTCGGCAGCGGGTTGAGCAAGGCTGGTAAGTTCATGGGCCGGACTATCACGGGAGGACATAGCAGTGCGAGAAAGAGTGGGGCATCTACTCCAGTCAATAATGCTCAGGAAAATGGTGGTGGTGCAAAGCCCCTGTGA 1578 0.443 MGLISGLFMGIALGIALMYGWQYMIKYRSAKRIAKAVDVKLLGSLDRDDIRKICGDNTPEWISFPVYEQVKWLNKQLSKLWPSVAEAGSMVIKESVEPLLEEYRPPGITSLKFSKLSLGNVAPKIEGIRVQSLKKGQIIMDIDFRWGGDPSIILAVEAAVVASIPIQLKDLQVFTIVRVIFQLAEEIPCISAVVVALLAEPKPRIDYTLKAIGGSLTAIPGLSDMIDDTVNSIVTDMLQWPHRIVVPIGGVPVDTSELELKPQGNLTVNVVKANDLKNMEMIGKSDPYVVVHIRPLFKVKTKVVDNNLNPVWDQMFNLIVEDKETQSLTLEVFDKDIGQDKRLGIVKLPLIDLEPETEKEIELRLLPSLDTLKVKDKKDRGSLTIKVLYHQYNKEEQLVALEAEKKILEERKKLKEAGVIGSTMDAIDGAASLVGSGVGMVGTGVLAGAGLVGSGIGAGAGLVGSGVGAGVGFVGSGLGAVGSGLSKAGKFMGRTITGGHSSARKSGASTPVNNAQENGGGAKPL 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0651 525 Gene3D C2 domain 259 417 IPR035892 -
Lele38g0651 525 FunFam synaptotagmin-4 isoform X1 259 417 - -
Lele38g0651 525 Coils Coil 391 418 - -
Lele38g0651 525 MobiDBLite consensus disorder prediction 496 525 - -
Lele38g0651 525 Pfam Synaptotagmin-like mitochondrial-lipid-binding domain 68 248 IPR039010 -
Lele38g0651 525 PANTHER EXTENDED SYNAPTOTAGMIN-RELATED 1 435 IPR045050 GO:0008289
Lele38g0651 525 SMART C2_3c 265 362 IPR000008 -
Lele38g0651 525 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 264 391 IPR035892 -
Lele38g0651 525 ProSiteProfiles C2 domain profile. 247 365 IPR000008 -
Lele38g0651 525 Pfam C2 domain 264 360 IPR000008 -
Lele38g0651 525 CDD C2 266 360 - -
Lele38g0651 525 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 66 249 IPR031468 GO:0008289
Lele38g0651 525 MobiDBLite consensus disorder prediction 499 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0651 Lele-ChrLele38 6444081 6462048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0651 266 367 Lipid Metabolism Gene Families AT4G00700 39.216 1.22e-09 59.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0651 38 6444081 6462048 Lele38g0651 38 6444081 6462048 ECH