Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0393 ATGGGAGCTTCCAAGGAAATCCGCTACACCCTCCTTCGTCCTTTTCGAAAGAAACACGAAAACGACGTCGTTCTACCCCTCTACAACCCCTCTCCGACCCGCCGTCAATGCCTCATCACCTGGGCCGTCGGCGTCGTGCTCTTCCTCGGGCTCATGTTCATTTGCTGGCCGTCCGGCCCGGTCCTGAAGATAGAACGGCTGAGGCTGCACCGGATAAAGGTGCACACGTTGCCGCACCTGACGGTGGACATATTGATGTCGGTGACGGTGAAGGTGTACAACGGCGACGTGTACTCGATGAACTACAAGTCGCTGGACGTGGCGGTGGGGTACAGGGGGAAGAAGCTGGGTCACGTGAGGGCGGATCATGGTCACGTGAAGGCGAAGGGGTCGTCCTACGTGGACGCCAGGCTGGAGTTCGCCGGAATCAGAGTGTTGTCCGACGTGGTGTTCTTCCTGGAGGACCTGGCCAAGGGCACTGTTCCTTTTGACACTTCCACGGAGGTCGAGGGCGACATGGGCATCCTTTTCTTTGATTTTCCTATGGAGGCCAAACTGCGGTGTGAGGTTTTGGTAAATATTGCAAATCAGGCAATTGAACGCCAAAGGTGTCACCGTAAGAGGTGA 627 0.5646 MGASKEIRYTLLRPFRKKHENDVVLPLYNPSPTRRQCLITWAVGVVLFLGLMFICWPSGPVLKIERLRLHRIKVHTLPHLTVDILMSVTVKVYNGDVYSMNYKSLDVAVGYRGKKLGHVRADHGHVKAKGSSYVDARLEFAGIRVLSDVVFFLEDLAKGTVPFDTSTEVEGDMGILFFDFPMEAKLRCEVLVNIANQAIERQRCHRKR 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0393 208 Pfam Late embryogenesis abundant protein 89 180 IPR004864 -
Lele38g0393 208 Gene3D - 60 190 - -
Lele38g0393 208 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 36 205 - -
Lele38g0393 208 SUPERFAMILY LEA14-like 60 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0393 Lele-ChrLele38 3172349 3175075 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0393 38 3172349 3175075 Lele39g1007 39 18814347 18816523 hybridization
Lele38g0393 38 3172349 3175075 Lele40g0373 40 3027056 3036502 hybridization