Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0374 ATGGCTTCCATTACTGCTAACCTGCCTCCAGCATTACTGGTCCATGGGGGAAAATCTTTTTCAGGGAACTTCAAAAGATCCCCTATTTCTCTTGTAACAGGGAGACAGAATCATGCTGCTGGTTTATTTACTCTGAGGGCTACTGGGGAAAGTTCTGAATCTTCAACCTCCCTTACTGTTATCAAGTCTGTTCAGAATGTTTGGGATAAACCTGAGGATCGGGTTGGACTAATTGGCTTGGGTTTTACAGCTGTGGTGGCACTTTGGGCATCGGCAAATCTGATTACGGCCATTGACAAATTGCCAGTTATCCCTGGTGTAATGGAATTAATTGGGATACTGTTCAGCTCATGGTTCACTTACCGCTATCTCTTGTTCAAGCCTGATAGGCAGGAGCTGGTCCAAATCTTGAAAAAATCAATTTCAGATATCTTGGAGAGGATTGGAAGAAAAAGAAGAGCTGAGGGTTTTGTTGCAGCCTTGCGGGGCTTAAATGACTGTGGAAAGAAAAAAAATATGGCTTGGTTTAGTGGATCAAATTCATGGGGAAACTTCCCTGATTTGGCGGGGGCAGTGAATAAGCTTCAGGAGAGTGTGAAGAGTATTGAGAAAAATTTTGACTCCGCTCTCGGGTTTGAAGAGAAGTCTGAATCCAGCAATGAAGACAAGAAAAGCTTATCCAATGCTGTTATGATCTTTACGGGGAATAACAGTGAGGAAAGTACTGAAAACACATCTGGACAGTCTAAATCATCTCAAGAAAAACCTGTATCTGAGGATGTGACGGAAAAAACTGAGCCTTTAGATCATCCAACAATTACTGAGGGAAAGGAAGGGGTTGGAAATGATAATGCAGCGCATACTGAAACTGAAGAAATTGCCTCTGGAGAAGAAAAGAAAGTGATCACAGTAGAGGAGGGTGATAAGTTTATAGAGTCAGCAAATGGGGCCATAATGCAGAAGTCAGATCATGAAAAGGAAGAAAACCAGTTAATTGCAATGCCAGCTGATTCGTCTGAACCAATCATTCAGAATGTCAAACGTCCTGTTTCTGCTGACAGTCCTCAAGAGAATGAAATTGGTGAAGTTGAGACTACTGCAAGTCTAGTGCCAGCGCAACTCCAGCCTGTTAATCATGGGCAGGATCAAGTTGACGGTAGTTTGAGTGAGCAAAGTGAGTTACATGGTGTTACTGATGCGCAAGACAATTTCCAAGTCAAGACAGAAGAGGAGAGGAAAGAAGAGAGGGTGCAAGAAGAAGCTATTATGGAGCAAGTTTCTCCTGTCCAACCTGAGGAATCTGGTAATAGCAAGGGTGGAGATGAGACGAAGCCTCCTGTTTTGCATTCTGTGGCTACTGAGGAAACTGGTAGCATTGATCAATCACATGATGAACACTTAACCAATGCTAGTCCTCAAAATGAGTCTCTTAATGTGCTACCCAAATTGGGTTTGCATGAAAATGAAGCAATTCACAGGGAAATTGACGGGGATCACTTGGTCAATGATGTTGAAACTGACAAGAAAGAGCAGCATTTCAGTTCTGTAACAGATAAGTCTGGCTCAGATTCTTTACTTGAACTGGAGAAGGTAAAGAGCGAGATGAAAATAATGGAAACTGCACTCCAAGGTGCTGCAAGACAAGCTCAGGCTAAAGCTGATGAGATAGCCAGATTGATGAGTGAAAATGAACACATGAAAGCTATGATTGAGGATTTAAAGAGAAAATCCAATGAGGCAGAAGTTGAGTCTTTGCGTGAGGAATATCATCAGAAGGTTGCAACTATTGAGCGAAAGTTGTATGCTCTCACTAAGGAAAGAGATACGCTTCGACGAGAGCAGAGTAAAAGAAGTGATGCAGCTGCTTTATTGAAGGAAAAGGATGAAATAATTACTCAGGTTATGGCTGAAGGTGAAGAACTTTCAAAAAAGCAGGCTACTCAGGAAGCTACAATAAGGAAATTAAGAGCTCAGATTAGAGAGCTTGAGGAGGAGAAGAAAGGTTTGACTACTAAACTTCAGGTGGAGGAGAATAAGGTAGAGAGTATCAAGAGGGACAAGTTGGCTACAGAGAAGTTATTGCAGGAAACAATAGAGAAACATCAAACAGAACTTGCAGCACAAAAAGAATATTATTCTAATGCTCTCGCTGCTGCTAAGGAGGCTGAAGCATTGGCTGAGGCACGTGCCAACACTGAAGCCAGAACTGAACTAGAGAGTCGACTAAGAGAGTCTGAGGAACGTGAATCTATGCTGGTCCAGGCACTTGAAGAATTGAGGCAAACTTTAAGTAGACAGGAACAACAGGCAGTCTTCAAAGAAGATATGCTTCGCAGGGACATTGAGGATCTTCAAAACCGATATCATGCAAGTGAAAGACGTTGTGAGGAACTGATTACACAAGTTCCTGAATCTACAAGACCGCTTTTAAGACAAATTGAAGCCATGCAGGAAACAAATGCCAGAAGGGCAGAAGCTTGGGCTACTGTTGAGAGAACCCTCAATTCTCGACTTCAGGAAGCAGAGGCTAAAGCTGCAGCTGCTGAAGAAAGAGAGCGATCCATAAATGAACGCTTATCTCAAACCTTGTCTCGAATTAATGTTCTTGAGGCTCAGATTTCATGCCTTAGAGCGGAACAGAGCCAGTTAAGTAGGTCCCTTGAGAAGGAGAGACAAAGGGCGGCTGAAAATAGGCAGGAATACCTTGCAGCCAAGGAGGAGGCTGACACTCAAGAAGGTCGTGTGAGACAACTTGAAAATGAGATTAGGGAACTGAGGCAGAAACATAAACAAGAGTTACAGGAGGCATTAATTCAGAGGGAACATCTACAGCAGGAGATCGAAAAGGAAAAGGCTGCACGAGTAGATTTGGAGAGGACTACTCGTGATCACATTCCCACAATGAAGAAAACTTCTGCTTCTGAGAACGGCAACCTTTCTCGGAAAGTCTCTAGTGCAAGCTCCTTGGGGAGCATGGAAGAAAGCTACTTTCTGCAGGCATCACTGGACTCATCTGACAGTTTCTCCGAGAGAAGAAACCCTGGGGAGCCAAGCATGAGTCTTTACCATATGAAGAGCATGACACCTAATGCTTTTGCAGCTGCACTTCGTCAAAAGGAGGGTGAACTTGCTTCATATATGTCACGTTTGGCATCACTGGAATCTATTCGTGATTCTCTTGCTGAGGAGTTGGTCAAAATGACAGGACAGTGTGAGAAGTTGCTTGGGGAGGCTGCCATGTTGCCCGGCTTACGAGCGGAGTTAGAAGCACTGAGGAAGAGGCACTCTGCTGCTTTAGAGTTGATGGGAGAACGTGATGAGGAGCTGGAGGAACTTCGTGCGGATATTGTGGACTTGAAGGAAATGTACAGAGAACAAGTCAGTTTACTTGTAAATAAGATCCAGAGAATGAATCCATCAACGGCTAGCGCCTAA 3435 0.4364 MASITANLPPALLVHGGKSFSGNFKRSPISLVTGRQNHAAGLFTLRATGESSESSTSLTVIKSVQNVWDKPEDRVGLIGLGFTAVVALWASANLITAIDKLPVIPGVMELIGILFSSWFTYRYLLFKPDRQELVQILKKSISDILERIGRKRRAEGFVAALRGLNDCGKKKNMAWFSGSNSWGNFPDLAGAVNKLQESVKSIEKNFDSALGFEEKSESSNEDKKSLSNAVMIFTGNNSEESTENTSGQSKSSQEKPVSEDVTEKTEPLDHPTITEGKEGVGNDNAAHTETEEIASGEEKKVITVEEGDKFIESANGAIMQKSDHEKEENQLIAMPADSSEPIIQNVKRPVSADSPQENEIGEVETTASLVPAQLQPVNHGQDQVDGSLSEQSELHGVTDAQDNFQVKTEEERKEERVQEEAIMEQVSPVQPEESGNSKGGDETKPPVLHSVATEETGSIDQSHDEHLTNASPQNESLNVLPKLGLHENEAIHREIDGDHLVNDVETDKKEQHFSSVTDKSGSDSLLELEKVKSEMKIMETALQGAARQAQAKADEIARLMSENEHMKAMIEDLKRKSNEAEVESLREEYHQKVATIERKLYALTKERDTLRREQSKRSDAAALLKEKDEIITQVMAEGEELSKKQATQEATIRKLRAQIRELEEEKKGLTTKLQVEENKVESIKRDKLATEKLLQETIEKHQTELAAQKEYYSNALAAAKEAEALAEARANTEARTELESRLRESEERESMLVQALEELRQTLSRQEQQAVFKEDMLRRDIEDLQNRYHASERRCEELITQVPESTRPLLRQIEAMQETNARRAEAWATVERTLNSRLQEAEAKAAAAEERERSINERLSQTLSRINVLEAQISCLRAEQSQLSRSLEKERQRAAENRQEYLAAKEEADTQEGRVRQLENEIRELRQKHKQELQEALIQREHLQQEIEKEKAARVDLERTTRDHIPTMKKTSASENGNLSRKVSSASSLGSMEESYFLQASLDSSDSFSERRNPGEPSMSLYHMKSMTPNAFAAALRQKEGELASYMSRLASLESIRDSLAEELVKMTGQCEKLLGEAAMLPGLRAELEALRKRHSAALELMGERDEELEELRADIVDLKEMYREQVSLLVNKIQRMNPSTASA 1144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0374 1144 Coils Coil 728 801 - -
Lele38g0374 1144 Coils Coil 831 960 - -
Lele38g0374 1144 Coils Coil 593 613 - -
Lele38g0374 1144 Coils Coil 1036 1063 - -
Lele38g0374 1144 MobiDBLite consensus disorder prediction 963 986 - -
Lele38g0374 1144 Pfam TATA element modulatory factor 1 TATA binding 1023 1128 IPR022091 -
Lele38g0374 1144 MobiDBLite consensus disorder prediction 404 421 - -
Lele38g0374 1144 Pfam TATA element modulatory factor 1 DNA binding 619 686 IPR022092 -
Lele38g0374 1144 MobiDBLite consensus disorder prediction 378 447 - -
Lele38g0374 1144 MobiDBLite consensus disorder prediction 256 273 - -
Lele38g0374 1144 Coils Coil 645 686 - -
Lele38g0374 1144 Coils Coil 528 583 - -
Lele38g0374 1144 MobiDBLite consensus disorder prediction 970 986 - -
Lele38g0374 1144 MobiDBLite consensus disorder prediction 378 403 - -
Lele38g0374 1144 MobiDBLite consensus disorder prediction 237 255 - -
Lele38g0374 1144 MobiDBLite consensus disorder prediction 456 475 - -
Lele38g0374 1144 Coils Coil 1102 1129 - -
Lele38g0374 1144 PANTHER GOLGIN CANDIDATE 5 173 1141 - -
Lele38g0374 1144 Pfam CAAD domains of cyanobacterial aminoacyl-tRNA synthetase 63 145 IPR025564 -
Lele38g0374 1144 MobiDBLite consensus disorder prediction 237 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0374 Lele-ChrLele38 3025639 3039364 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0374 38 3025639 3039364 Lele40g0350 40 2880450 2893935 hybridization