Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0317 ATGGGTAGCTCGGGAGAGTCCAACGCTAACGGAATCGATGCGTCGGTGGGTGGCTTGGTTTGGGTCCGACGCCGAAATGGGTCTTGGTGGCCTGGCAGGATAATGGGTCTGGATGAATTGTCTGAGGGTTGTTTGGTTTCGCCGAGATCGGGTACTCCAGTTAAGCTGTTGGGTCGCGACGACGCAAGTGTGGATTGGTATAATCTTGAAAAATCAAAGCGTGTTAAAGCTTTCCGTTGTGGAGAGTATGATGAGTGCATTGAGAAGGCAAAGGCTGCTGCTGCTAGTTCGAATAAGAAAACTGTGAAGTATGCTCGCAGGGAAGATGCTATTCTCCATGCTCTTGAGATAGAGAGTTCTCGCCTTGATAAAGAAACATTAAAATTTTACTCAAGAGCAGATAAATCGGCTAATGAAAACGGTGATTCAGCTGGAGCCTCACAAGGCACATTGAATTCTGGGGATGACAATGAGGATATGACCGATGATCTGAGTGATTCTGAAGACAATTCTAATTCAGCTCCAGGATTATCTCAATCTCGTATATCTTTTGAAGAGCCAAATCACAATGGTTCCTCCAAGATGCGAACTGTTCAGGGAAGAAGAAGAACCCCTAATGATTCAGAAGATGATGGGACAGGAGTAAAGCGAATGAGAGGACTTGAGGACCTTGGTATTGGTGTAGCCTCAAATAGAAAGGTCCTGGGAGCAGGGACAACTGTTGTAGTTCAGCAGGATAGTGCTTCTCCCTGCAAATCACACACAGGAAATGGCCTGGCAAATGGAACTTCTGTAAATGGCGTTAAGGGTAGTTCTTCAACTCTGAGAAGGAAGAGATCGCAGGTGGCTAATGTTCATGAATTCTTGAAAAGGAAAAGTAAACGCCGGCCTTTGACAAAGGTTTTGGAGAGTACGGCCGTGGTATCAATTCCTGTTGTTTGTGATCAGCTTCCTAGTTCAACCAGTTCTCCACTTTGTGGGATATCTGAAGGCAGAATTTCAGGATTAGATTCCAATGAGTCAAAGAAAAGCTCTCCGCTGGTAATACATAACATGGATGGTACAGGAGTTGAATGTGAGAAGGGGACTGCTTTAAATGCTCATGAACAGGGCAATGATGCTTCCCAAATTAGTCACAATGTCAAGGAGAATGAGGCTTCTGGTGGTGGGTCAGGGATGGTTGGGAATGATTCTTCCGATAAATTATTCGATGTGCCATTTGTTGGAGTTTTGGGGGAGGAGAAACATGCACCAGGTTTCTCTCCCATTCTTGGTTCTTGTTCATCGGGAAAGCCTCAAGTTGCTAGGTATGGAAAACAAACTTGTCATGGTGGTCAATCTGATGCTCGGTCATTGCAAGAGGTTGGCCGGAATGAATCCGGTCCTACTAGCCCAGCTGCTGATCATAATAATACTATTGCCTATAGGGTTGAGAAAAGTAGCTCAAAATGGCAGTCAAAGAGAAAGAGGAATTCTAGACGTAGAAGTAAAAATAGAAAACAAGGCTCAAGAAAATTTGTGGACATGGATAATGAACCCGCTGCTTATTTGGCAGGTCTCGAGAAGCCAGACGGGTTCTCTTGGGTTGCTGGTCCTAAAGCTGAATTAAATGTCTCGAGTGTACCTGCTGCTTCATACAATTGTACCTCTCAGGCTAAGTGCAAACCAGATGCTGAAAGTCATCTCGATGAATTTCATGACATAAGCAAGCATACGAGGGGGATAATGACTGGGGTGAAGTTGATTCCCGATGGATCACCAATGACTCAAAGATCGCTTCCTTATCGCCAATCCCGTTTTACTGTCAATTCGAGATATCAAACAGTGGATTTCCCTGGTAGAAATTATTTCTCTGATGCATCATTATATGAAGTTAAACTTGAAGTTAAAGCCAGCTATAGGCCACAACATGTACCTTTGGTTTCTCTTATGAGTAAACTGAATGGTAAAGCAATTGTAGGGCACCCTCTGACAGTCGAGACTTTAAGCGATGGTTATTGTGATGAATTGCTGAGTAGCATCAGATGTGACTCAGAAGTCGGTGGCATTTATTGTGCTGTTAAGCCATACTCAGTGACAGGAATAATACATTCCAAGAATTCTCCTCGTTTTTCGCCTAGTAAATCTTCCAGATCAAAAAAATCTGGGCTGTTGTCCAAAAAGATCCGGAAATTGTCATCACTGACCGGTCACCGGCAATCGGACGAGGATAGAAAACCCGTGGTGGATAATAAGCCAAAGGGTCCTGTTATAGCATGTATACCCCTGAAGGTGGTTTTTAGTCGGATAAACGAGGCGGTGAATGGTCAAGCCCGGTCAACATACCGTGTAGTATCGACATCCAACCCTTGA 2352 0.4435 MGSSGESNANGIDASVGGLVWVRRRNGSWWPGRIMGLDELSEGCLVSPRSGTPVKLLGRDDASVDWYNLEKSKRVKAFRCGEYDECIEKAKAAAASSNKKTVKYARREDAILHALEIESSRLDKETLKFYSRADKSANENGDSAGASQGTLNSGDDNEDMTDDLSDSEDNSNSAPGLSQSRISFEEPNHNGSSKMRTVQGRRRTPNDSEDDGTGVKRMRGLEDLGIGVASNRKVLGAGTTVVVQQDSASPCKSHTGNGLANGTSVNGVKGSSSTLRRKRSQVANVHEFLKRKSKRRPLTKVLESTAVVSIPVVCDQLPSSTSSPLCGISEGRISGLDSNESKKSSPLVIHNMDGTGVECEKGTALNAHEQGNDASQISHNVKENEASGGGSGMVGNDSSDKLFDVPFVGVLGEEKHAPGFSPILGSCSSGKPQVARYGKQTCHGGQSDARSLQEVGRNESGPTSPAADHNNTIAYRVEKSSSKWQSKRKRNSRRRSKNRKQGSRKFVDMDNEPAAYLAGLEKPDGFSWVAGPKAELNVSSVPAASYNCTSQAKCKPDAESHLDEFHDISKHTRGIMTGVKLIPDGSPMTQRSLPYRQSRFTVNSRYQTVDFPGRNYFSDASLYEVKLEVKASYRPQHVPLVSLMSKLNGKAIVGHPLTVETLSDGYCDELLSSIRCDSEVGGIYCAVKPYSVTGIIHSKNSPRFSPSKSSRSKKSGLLSKKIRKLSSLTGHRQSDEDRKPVVDNKPKGPVIACIPLKVVFSRINEAVNGQARSTYRVVSTSNP 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0317 783 MobiDBLite consensus disorder prediction 200 218 - -
Lele38g0317 783 SUPERFAMILY Tudor/PWWP/MBT 14 119 - -
Lele38g0317 783 PANTHER T17B22.17 PROTEIN-RELATED 1 775 IPR044679 -
Lele38g0317 783 MobiDBLite consensus disorder prediction 248 279 - -
Lele38g0317 783 MobiDBLite consensus disorder prediction 136 155 - -
Lele38g0317 783 Gene3D - 4 126 - -
Lele38g0317 783 ProSiteProfiles PWWP domain profile. 16 71 IPR000313 -
Lele38g0317 783 MobiDBLite consensus disorder prediction 135 218 - -
Lele38g0317 783 MobiDBLite consensus disorder prediction 444 480 - -
Lele38g0317 783 Pfam PWWP domain 18 105 IPR000313 -
Lele38g0317 783 MobiDBLite consensus disorder prediction 167 199 - -
Lele38g0317 783 MobiDBLite consensus disorder prediction 486 501 - -
Lele38g0317 783 MobiDBLite consensus disorder prediction 419 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0317 Lele-ChrLele38 2513030 2518837 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0317 38 2513030 2518837 Lele38g0317 38 2513030 2518837 ECH
Lele38g0317 38 2513030 2518837 Lele39g1091 39 19476173 19486076 hybridization
Lele38g0317 38 2513030 2518837 Lele40g0296 40 2403064 2409566 hybridization