Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0364 ATGGAGAGCAACGTGCCAGCAATAGCTAAGAGAGTGTGGAACATGGTTCGCGTTGTCTTCTTCATGATGAAAAAAGGCATATCTAAGGGAAAAATCATGATGCACCTCAACATGATGCTCAAACACCGCGGTAAGCTCGCCGGAAAGGCCATCGCCAACCTCATGTTCCACCACCCCCATCACCATCACGGAAGCTCCAGCTCCTCCGACAACCCCCACCTCCAGTTCTCTGCGGGACGCGAGTATGAGTTCAGCTGCAGCAACACTCCCAACTACAGTTTCTTCCCAAAGCGCCGCAACCAGCACCACCGCCACAGCCACAGCAACAATCCCTTCTTCTTCGCGTGTGCTCACGCGCCACTCACTCAGGACGACGACATGGTAGCCGTCGGCAACGCGCTCAATGTGGCGTTGGAGATGCTAGATAACAACAATGTTCCTAACAACAACTATAGCAAGGATATGGTGGAGGCATCTCCGGCTCTTCCCGGGTTCGGAAGGAGCCCGATGGTGAGGCAGCTGAGGGTGACGGACTCGCCCTTCCCCTTGCAAGACGGCAACCAGGACAGGGACCACCAAGTGGACAAGGCGGCGGAGGAGTTTATAAACAGGTTTTACAAGGACCTGAGGAAGCAAGCTTGA 642 0.5467 MESNVPAIAKRVWNMVRVVFFMMKKGISKGKIMMHLNMMLKHRGKLAGKAIANLMFHHPHHHHGSSSSSDNPHLQFSAGREYEFSCSNTPNYSFFPKRRNQHHRHSHSNNPFFFACAHAPLTQDDDMVAVGNALNVALEMLDNNNVPNNNYSKDMVEASPALPGFGRSPMVRQLRVTDSPFPLQDGNQDRDHQVDKAAEEFINRFYKDLRKQA 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0364 213 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 5 212 - -
Lele37g0364 213 Pfam Cotton fibre expressed protein 192 212 IPR008480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0364 Lele-ChrLele37 3074245 3074886 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0364 37 3074245 3074886 Lele38g0344 38 2797333 2797929 ECH
Lele37g0364 37 3074245 3074886 Lele37g0364 37 3074245 3074886 ECH
Lele37g0364 37 3074245 3074886 Lele39g1061 39 19221833 19222435 hybridization
Lele37g0364 37 3074245 3074886 Lele40g0323 40 2663013 2663546 hybridization