Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0333 ATGGGTAGCTCGGGAGAGTCCAACGCTAACGGAATCGATGCGTCGGTGGGTGGCTTGGTTTGGGTCCGACGCCGAAATGGGTCTTGGTGGCCTGGCAGGATAATGGGTCTCGATGAATTGTCTGAGGGTTGCTTGGTTTCGCCGAGATCGGGTACTCCAGTTAAACTGTTGGGTCGCGACGACGCAAGTGTGGATTGGTATAATCTTGAAAAATCAAAGCGTGTTAAAGCTTTCCGTTGTGGAGAGTATGATGAGTGCATTGAGAAGGCAAAGGCTGCTGCTGCTAGTTCGAATAAGAAAACTGTGAAGTATGCTCGCAGGGAAGATGCTATTCTCCATGCTCTTGAGATAGAGAGTTCTCGCCTTGGTAAAGAAACATTAAAATTTTACTCAAGAGCAGACAAATCGGCTAGTGAACATGGTGATTCAGCTGGAGCCTCACCTGGCATATCGAATTCCGGGGATGACAATGAGGATGTGTCGGATGATTTGAGTGATTCTGAAGACAATTCTAATTCAGCTCCAGAATTATCTCAATCTGGTATATCTTTTGAAGAGCCAAATCACAACGGTTCCTCCAAGAGGCAATCTGTTCAGGGGAGAAGAAGAACGCCTAATGATTCAGAAGACGATGGAACAGGAGTAAAGCGAATGAGAGGACTTGAGGACCTTGGTATAGGTGTAGCCTCAAAGAGAAAGGTCCAGGGAGCAGGGGCCACTGTTGTAGTTCAGCAAGATAGTGCTTCTCCTAGCAACTTACACACAGGAAATGACCTGGCAAATGGAATTTCTGTAAATGGCGTTAAGGTTAGTTCTTCAACTCTGAGAAGGAAGAGATCGCAGGTGGCTAATGTTCATGAATTCTTGAAAAGGAAAAATCGACGCCGGCCTTTGACAAAGGTTTTGGAGAGTACAGCTATGGTATCAATTCCTGTTGTTTGTGATCAGCTTCCTAGCTCTACCAGTTCTCTGCTTTGTGGGATATCTGATAGCCGAATTTCAGGATTAGATTCCAATGGGTCAACGAAAAGCTCTCCGCTTGTAACACATAATATGGATGATGGTACAGGAGTTGAACGTGAGAAGGGGACTGCTTTAAATGCTCATGAGCAGGGCAATGCTGCTTCCCAAATTAGTCACAATTTCAAGGAGAATGAGGCTTCTGGTGGGTCAGGGCTGGTTGGAAATGGTTCTTCTGATAAATTATTCGATGTGTCATTTGTTGGAGTTTTGGGAGAGGAGAAACGTACACCCGGTTTCTCTCCCATTCTTGGTTCTTGTTCAACGGGAAAGCCTCAAGTTGCTAGCTTTGGACAACAATCTTGTCTTGGTGGTCAATCTGATGCTCGGTCATTGCAAGAGGAGGGCCAGAATGAATCCGGTCCTACTAGCCCAGCTGCTGGTCATAGTAATACTATTGCCCATAGAGTTGAGAAAAGTAGCTCAAAATGGCAGTCAAAGAGAAAGAGGAATTCTAGACATAGAAGTAAAAATAGAAAACAAGGCTCAAGGAAATTTGTGGACATGGATAATGAACCCTCTGCTTATTTGGCAGGTCTTGAGAAGGCAGACGGGTTCTCTCAGGTCGCTGGTCCTAAAGGTGAATTAAATGTCTCAAGTGTACCTGCTGCTTCATACCATTGTACCTCTCAGGCTAAGTGCAAACCAGTTGCTGAAAGTCATCTTGATGCATTTCATGACATGAGCAAGCATACGAGGGGTATAACAACCGGGGTGAAGTTGATTCTTGATGGATCACCCATGACTCAAAGATCTCTTCCTTATCGCCAATCCCGGTTTACTGTCAATTCAAGATATCAAACAGTGGATTTCCCTGGTAGAAATTATTTTTCTGATGCCTCATTATATGAAGTTAAGCTTGAAGTTAAAGCCAGCTATAGGCCACAACATGTACCTTTGGTTTCTCTTATGAGTAAACTGAATGGTAAAGCGATTGTTGGTCACCCTCTGACAGTTGAGACTTTAAGCGATGGTCATTGCGATGAATTTCTGAGTAGCATCAGATGTGACTCAGAAGTCGCTGGCATTTATTATGCTGTTAAGCCAAACTCAATGACAGCAATAATGCAATCCAAGAATTCTCCTCGTTTTTCGCCTAGTAAATCTTCCAGATCGAAAAAATCTGGGCTGTTGTCCAAAAAGATCAGGAAATTGTCATCACTGACCGGTCACCAGCAATCGGATGAGGATAGAAAACCCGTGGTGGATAATAAGCCAAAGGGTCCTGTTATAGCATGTATACCCCTGAAGTTGGTTTTTAGTAGGATAAACGAGGCGGTGAATGGTCAAGCCCGGTCAACATACCGTGTAGTACTGACATCCAACCCTTGA 2352 0.4439 MGSSGESNANGIDASVGGLVWVRRRNGSWWPGRIMGLDELSEGCLVSPRSGTPVKLLGRDDASVDWYNLEKSKRVKAFRCGEYDECIEKAKAAAASSNKKTVKYARREDAILHALEIESSRLGKETLKFYSRADKSASEHGDSAGASPGISNSGDDNEDVSDDLSDSEDNSNSAPELSQSGISFEEPNHNGSSKRQSVQGRRRTPNDSEDDGTGVKRMRGLEDLGIGVASKRKVQGAGATVVVQQDSASPSNLHTGNDLANGISVNGVKVSSSTLRRKRSQVANVHEFLKRKNRRRPLTKVLESTAMVSIPVVCDQLPSSTSSLLCGISDSRISGLDSNGSTKSSPLVTHNMDDGTGVEREKGTALNAHEQGNAASQISHNFKENEASGGSGLVGNGSSDKLFDVSFVGVLGEEKRTPGFSPILGSCSTGKPQVASFGQQSCLGGQSDARSLQEEGQNESGPTSPAAGHSNTIAHRVEKSSSKWQSKRKRNSRHRSKNRKQGSRKFVDMDNEPSAYLAGLEKADGFSQVAGPKGELNVSSVPAASYHCTSQAKCKPVAESHLDAFHDMSKHTRGITTGVKLILDGSPMTQRSLPYRQSRFTVNSRYQTVDFPGRNYFSDASLYEVKLEVKASYRPQHVPLVSLMSKLNGKAIVGHPLTVETLSDGHCDEFLSSIRCDSEVAGIYYAVKPNSMTAIMQSKNSPRFSPSKSSRSKKSGLLSKKIRKLSSLTGHQQSDEDRKPVVDNKPKGPVIACIPLKLVFSRINEAVNGQARSTYRVVLTSNP 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0333 783 MobiDBLite consensus disorder prediction 200 218 - -
Lele37g0333 783 MobiDBLite consensus disorder prediction 438 479 - -
Lele37g0333 783 MobiDBLite consensus disorder prediction 136 219 - -
Lele37g0333 783 MobiDBLite consensus disorder prediction 697 718 - -
Lele37g0333 783 Pfam PWWP domain 18 105 IPR000313 -
Lele37g0333 783 ProSiteProfiles PWWP domain profile. 16 71 IPR000313 -
Lele37g0333 783 MobiDBLite consensus disorder prediction 697 713 - -
Lele37g0333 783 MobiDBLite consensus disorder prediction 438 510 - -
Lele37g0333 783 Gene3D - 4 122 - -
Lele37g0333 783 MobiDBLite consensus disorder prediction 167 199 - -
Lele37g0333 783 MobiDBLite consensus disorder prediction 486 501 - -
Lele37g0333 783 PANTHER T17B22.17 PROTEIN-RELATED 1 776 IPR044679 -
Lele37g0333 783 SUPERFAMILY Tudor/PWWP/MBT 14 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0333 Lele-ChrLele37 2801930 2807630 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0333 37 2801930 2807630 Lele41g0921 41 18712391 18715091 CCT
Lele37g0333 37 2801930 2807630 Lele42g0901 42 21772700 21781466 CCT
Lele37g0333 37 2801930 2807630 Lele43g0486 43 4424208 4426917 CCT
Lele37g0333 37 2801930 2807630 Lele44g0456 44 3423879 3426672 CCT
Lele37g0333 37 2801930 2807630 Lele37g0333 37 2801930 2807630 ECH
Lele37g0333 37 2801930 2807630 Lele39g1091 39 19476173 19486076 hybridization
Lele37g0333 37 2801930 2807630 Lele40g0296 40 2403064 2409566 hybridization