Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0316 ATGAACGAACGACCTCATCGCCCACACACCACACACCACACTTTCTTCAAAGACTCGGCGTGCTTCCTCATCTCAACCTCCCTCCTATATTATATATACCCTCCCTTTGCCCTTTCTTCTGTCAGCTTGACGTTCCCTTCTCCGAGAGAACACCAAGCTTCCAATATCATTTCTCTCTCTCCCCCTCCCCCTCTTCACATTTTCTGTTTTATTTTCCATCTCAACCATCTTCTTCTTCCGCTCGACATGCAGTCTCTTTCCTCTCACCCTTCCAATTCTCTCAACTACCTCTTCCAGACCCGCCCTTCCGCGCATCGGGCCCCTCCGACCCGATTCTCCGTCAAATGCGCTTATGGCTTCGAATCCGCTGGATTTCATTCCGGGTTCGGATCCTCCCGGGCTGATTGGCAGAGTTCCTGCGCCATCTTAGCTAGTAAGGTTGTTTCTCAGGAACAATCTTCCGCCGATTCCAACGGAGGAGCGGCTGACCCCGTCGCCGCCATCAACGGCCATAAGGCCGCCGTCACGGATCTCAATCTCGTCCCCATCGGTAACTTAGGAGGCAGCAGCGACATTAGCAAGCCGCTTCCGCCGAAGCCGCTCACTATTTCGGATCTCTCTCCTGCTCCGATGCATGGCTCGCAGCTCCGTGTGGCCTACCAGGGTGTTCCCGGAGCATACTCCGAAGCGGCTGCCGGCAAGGCCTATCCGAAATGTGAAGCCATTCCTTGTGACCAATTCGAGGTAGCTTTCCAAGCTGTACAGCTCTGGATCGCCGATCGAGCAGTTCTTCCGGTGGAAAACTCTCTCGGAGGCTCGATCCACCGGAACTACGATCTCCTCCTCCGCCACCAGCTTCACATCGTCGGGGAGGTTCAACTTCCCGTGCACCACTGCCTTCTTGCGCTTCCGGGAGTTCGTAAGGAATATCTAACCCGCGTCATCTCGCATCCGCAAGCCCTCGCGCAGTGCGAGCACTCCCTAACCAAGCTTGGCCTCAACGTAGCACGCGAGGCCGTGGACGACACAGCCGGCGCTGCGGAATTCATCGCAAGCAACAACCTACGCGACACGGCGGCAATCGCTAGTGCACGCGCGGCGGAGCTGTACGGATTGCAGGTCTTAGCAGATGGAATCCACGACGACCCGAGTAATGTGACCCGATTCGTGATGCTGGCCCGGGAACCCATAATTCCGCGGACGGATAGGCCCTTCAAGACAAGCATAGTGTTCGCCCACGATAAGGGGACGTCCGTACTGTTCAAGGTTCTATCGGCTTTCGCTTTCAGGAACATTAGTTTGACGAAGATTGAGTCAAGACCTCACCGGAGCCGCCCGATTAGGGTGGTGGACGATGCGAATGTTGGGACGGCGAAGCACTTCGAGTATATGTTCTACGTTGATTTCGAAGCCTCCATGGCAGAGGTTAGGGCTCAGAACGCCTTAGCAGAGGTTCAGGAATTCACATCCTTCTTGAGGGTGTTGGGGAGTTATCCTATGGACATGACTCCATGGAGCCCCTCTTCTTCCTCTTGTCCCATGGGAGATTAG 1551 0.5532 MNERPHRPHTTHHTFFKDSACFLISTSLLYYIYPPFALSSVSLTFPSPREHQASNIISLSPPPPLHIFCFIFHLNHLLLPLDMQSLSSHPSNSLNYLFQTRPSAHRAPPTRFSVKCAYGFESAGFHSGFGSSRADWQSSCAILASKVVSQEQSSADSNGGAADPVAAINGHKAAVTDLNLVPIGNLGGSSDISKPLPPKPLTISDLSPAPMHGSQLRVAYQGVPGAYSEAAAGKAYPKCEAIPCDQFEVAFQAVQLWIADRAVLPVENSLGGSIHRNYDLLLRHQLHIVGEVQLPVHHCLLALPGVRKEYLTRVISHPQALAQCEHSLTKLGLNVAREAVDDTAGAAEFIASNNLRDTAAIASARAAELYGLQVLADGIHDDPSNVTRFVMLAREPIIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRSRPIRVVDDANVGTAKHFEYMFYVDFEASMAEVRAQNALAEVQEFTSFLRVLGSYPMDMTPWSPSSSSCPMGD 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0316 516 ProSitePatterns Prephenate dehydratase signature 2. 434 441 IPR018528 GO:0004664|GO:0009094
Lele32g0316 516 PANTHER PREPHENATE DEHYDRATASE P PROTEIN 117 508 - -
Lele32g0316 516 FunFam Arogenate dehydratase 401 502 - -
Lele32g0316 516 Gene3D - 301 382 - -
Lele32g0316 516 ProSiteProfiles Prephenate dehydratase domain profile. 217 394 IPR001086 GO:0004664|GO:0009094
Lele32g0316 516 CDD PBP2_Ct-PDT_like 217 396 - -
Lele32g0316 516 Gene3D - 212 300 - -
Lele32g0316 516 ProSitePatterns Prephenate dehydratase signature 1. 370 392 IPR018528 GO:0004664|GO:0009094
Lele32g0316 516 Gene3D - 401 502 - -
Lele32g0316 516 SUPERFAMILY Periplasmic binding protein-like II 217 400 - -
Lele32g0316 516 ProSiteProfiles ACT domain profile. 408 499 IPR002912 -
Lele32g0316 516 FunFam Arogenate dehydratase 300 382 - -
Lele32g0316 516 CDD ACT_CM-PDT 406 499 - -
Lele32g0316 516 FunFam Arogenate dehydratase 212 299 - -
Lele32g0316 516 SUPERFAMILY ACT-like 389 501 IPR045865 -
Lele32g0316 516 Pfam Prephenate dehydratase 218 396 IPR001086 GO:0004664|GO:0009094
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0316 Lele-ChrLele32 1962554 1964104 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0327 29 1994639 1995943 Lele32g0316 32 1962554 1964104 hybridization
Lele30g1075 30 13967734 13969038 Lele32g0316 32 1962554 1964104 hybridization