Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0190 ATGGCGGCCTCCATGGCTGGATCACAATTATCCCATTTCTCCTATCATGCTAAGCACCAATCTTCTCCGGCCGATATCTCACCGCCAACCACCTTCAAACCGTTCGATTGTCATCCGAAGCGCTACCGGAGCCCTTCCATTCGGGCCTTACTCCAGGGAGAGAACGAACTCGAGAAGAACCCCCAAGCTCTCGATTTGCCAAGCGCCCATGACTTCTCTAGCGACGTCGTCTCCAAAGACATGCTCGCCCTTCCGCGGCCATTGTCTTCCGCTCAGTTATCTGGCTCAGTTTCTGATGGATCTCGCCTTCGTGTGGGATACCAGGGAGTTTGCGGCGCTTACAGCGAGTCAGCCGCACAGAAGGCCTACCCAAATTGTGAAGCAGTGCCTTGCGACGAATTTGACACCGCTTTTGAAGCTGTTGAAAGGTGGCTTGTGGACAGAGCAGTTTTACCGATCGAGAATTCTTTAGGAGGGAGCATTCACAGAAATTATGATCTACTACTCCGGCACAGGTTGCATATAGTGGGAGAAGTAAAATATGCAGTCCGCCATTGTCTGTTGGCCAATCATGGTGTTAAACTTGAGGATTTGAAGCGGGTACTTAGTCATCCACAGGCTCTTGCTCAGTGTGAGGACACATTGACAAGGTTGGGATTGGTCAGAGAAGCAGTAGATGACACAGCTGGTGCTGCAAAGCATGTGGCTTTCCACAAACTACCGGATGCAGGGGCAGTTGCTAGTTCTGCCGCCGCCAAGATCTATGACTTGAATATACTTGCTCAAGACATTCAGGATGATAGTGATAATATCACTCGATTTTTAATGTTAGCACGAGAACCTATTATTCCAGGCACAGATAGGCTATTTAAGACAAGCATAGTTTTTTCTTTAGAGGAGGGTCCTGGCGTACTGTTCAAGGCACTTGCTGTTTTTGCTCTGCGACAAATCAACCTCACAAAGATAGAAAGTCGGCCATTGCGGAACCAACCTCTTCGAGCATCATCTGACGATAGCAATAGTGGACCCAAGTACTTTGATTATCTTTTCTATGTGGATTTCGAAGCATCGATGGCTGATCAGAATGCACAAAATGCCCTAAGGCATCTAAAGGAGTTTGCTACATTCCTTAGAGTGCTTGGTAGTTATCCAGTGGACACAAGAACAGTATATAACGATAAACAGGTGGCAATGTTATGGAAGATGAACCTATTGTGTCATTGA 1224 0.4739 MAASMAGSQLSHFSYHAKHQSSPADISPPTTFKPFDCHPKRYRSPSIRALLQGENELEKNPQALDLPSAHDFSSDVVSKDMLALPRPLSSAQLSGSVSDGSRLRVGYQGVCGAYSESAAQKAYPNCEAVPCDEFDTAFEAVERWLVDRAVLPIENSLGGSIHRNYDLLLRHRLHIVGEVKYAVRHCLLANHGVKLEDLKRVLSHPQALAQCEDTLTRLGLVREAVDDTAGAAKHVAFHKLPDAGAVASSAAAKIYDLNILAQDIQDDSDNITRFLMLAREPIIPGTDRLFKTSIVFSLEEGPGVLFKALAVFALRQINLTKIESRPLRNQPLRASSDDSNSGPKYFDYLFYVDFEASMADQNAQNALRHLKEFATFLRVLGSYPVDTRTVYNDKQVAMLWKMNLLCH 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0190 407 SUPERFAMILY Periplasmic binding protein-like II 104 285 - -
Lele32g0190 407 Gene3D - 287 387 - -
Lele32g0190 407 FunFam Arogenate dehydratase 286 387 - -
Lele32g0190 407 CDD ACT_CM-PDT 291 384 - -
Lele32g0190 407 FunFam Arogenate dehydratase 99 186 - -
Lele32g0190 407 ProSitePatterns Prephenate dehydratase signature 2. 319 326 IPR018528 GO:0004664|GO:0009094
Lele32g0190 407 Gene3D - 99 187 - -
Lele32g0190 407 CDD PBP2_Ct-PDT_like 104 281 - -
Lele32g0190 407 ProSitePatterns Prephenate dehydratase signature 1. 255 277 IPR018528 GO:0004664|GO:0009094
Lele32g0190 407 PANTHER PREPHENATE DEHYDRATASE P PROTEIN 59 390 - -
Lele32g0190 407 SUPERFAMILY ACT-like 274 385 IPR045865 -
Lele32g0190 407 ProSiteProfiles ACT domain profile. 293 384 IPR002912 -
Lele32g0190 407 FunFam Arogenate dehydratase 187 267 - -
Lele32g0190 407 Pfam Prephenate dehydratase 105 281 IPR001086 GO:0004664|GO:0009094
Lele32g0190 407 ProSiteProfiles Prephenate dehydratase domain profile. 104 279 IPR001086 GO:0004664|GO:0009094
Lele32g0190 407 Gene3D - 188 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0190 Lele-ChrLele32 1144927 1151249 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g1205 30 14812607 14816245 Lele32g0190 32 1144927 1151249 hybridization