Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0147 ATGCACAAACTGCCAGGCTGTCAGCGTGTTGTCCTGGTGGCAACTAATGGGGGGCCATTACACGTGGCAGTTAGAAACTTTAATGCTTGCTTTCCGCTTCTGTACTTCATTGTGACGAGGACAGTTGGTGTGTTTTCGATAACTGTTGTTGCTGCCCAGGAGCTTTCACTTTCCGAAATTTCAAGGATTCAAACAATGGCAGCCAATTCTTCCAATGGGGATCACCAAACATCAACGAGACCACCGCCCTTGCCATCTCCCTTGCGTTTTTCCAAATTCTTTCAGTCCAATATGAGAATTTTGGTTACTGGAGGAGCTGGATTTATTGGCTCTCACCTAGTGGACAGATTGATGGAAAATGAAAAAAATGAGGTAATAGTTGTTGATAACTACTTCACTGGATCCAAAGACAATCTCAGAAAATGGATTGGCCACCCAAGATTCGAGCTCAAGCGTCATGATGTCACAGAGACTTTGTTGGTTGAAGTTGATCAGATTTACCATCTTGCATGTCCCGCTTCTCCTATCTTCTACAAATACAATCCTGTGAAGTTTGATAGAAAACGATTATCCCGTCAAGATTTCAGCTCACAGACCCAGAAAGCGACTTTACGGCCTACAATAAAGACAAATGTGATTGGCACATTGAACATGCTGGGGCTTGCAAAACGAGTTGGTGCAAGGATTTTGCTTACATCAACATCAGAAGTATATGGAGACCCTCTTGTGCACCCACAACCTGAAAGCTATTGGGGCAATGTTAATCCCATAGGTGTTCGGAGCTGTTATGACGAGGGAAAGCGTGTGGCGGAAACTTTGATGTTTGATTATCATAGGCAGCATGGAATAGAAATACGTGTTGCAAGAATCTTTAACACATATGGACCGCGCATGAATATTGATGACGGTCGTGTTGTCAGCAACTTCATTGCACAAGCACTTCGGGGTGAACCGTTGACCGTCCAATCTCCAGGAACTCAAACTCGCAGTTTCTGTTATGTCTCTGACCTGGTCGACGGCCTTATCCGTCTCATGGAAGGGGAGCACACTGGTCCAATCAATCTTGGAAACCCAGGTTACATTTCGACTGCAAAACTTGCCCTTAACTTTTGCCCATGCCAGCTTATCAATCCAAACGTAGAGATAAAGACGGTAGATAACACTCCCGATGACCCTCGACAGAGAAAACCTGATATAACAAACGCAAAGGAATTGCTTGCTTTGGGAGTTCTGATTGAGACCTTTCCGATGGATGACAAAGGATATGATGGGATGAGAAGTGACCACAACACTCGATTGGATTTAAGGCGGTGCTTTCGCCAACATCTGTGTAGATATCCAGGACATGACCCCCAAGCTCAATCTGCCCCTCGACGCTCTGGATATCTCGATGCTCTCTCTCAAGCCATTTACAAGAAGCTCCAGCGGGCGATGACTAGTTCGTCACAGAGGCGCAATTTGCTGCAGGAGTTATTTGCAGACATAGCTTTAGAAGTTGATGATCGAGCTAAGGATATAATTTTCGGCAAGGATGAAGATGTAATTTCTCCTTCAAACATTGGTGATGGCCTGTTATGTTTCTATGATGTGCTCGCTGATTATTTCGTGCGGATGCCTTCAAGTGGAAAGCCTATCCTTGACTTGATTGTCCAACTGTGGAGCCAGTCATTTGCCTCCCATATTTTTGCTCTCTTGTTCCACAAATGGTTATTTGAAGTTCAACTTGATAATCCAGAAGTGCTTCTTCGCTATTCATCTGCTTTGGTTCAAGGCGCCACAAATGTTTTCTGGATTGACATTCAAACAAACACGAGGCGTTTCCAGTCCCTCTTTCATTACCTTCTGGAGGATGTTGCATTGGACAACTCAAGATTGAATAAAATTCCTATACAAGCTCAGCGAGATATGTATCTTCTGCTTTCAAGATTTATTCTATTTTATAACTCAGCTGACAAAATGGAAAGCTTCTTGAAACAATGCCCGGATTTCCCAAACGCAATATTGATTGGTGGTCCAGCTGATATATTCGTTACCGAACTGACTGATCAGCTTCAGAAGTTAAAAGTGGAACCAGTGCTGCTCCATTACCTTAAAGAAATTAGAGTACTTCAAGGGATGGAACTGAGACTGACTACAAGTACGAGATTGAAAACATGCTTGTACAGTTTCACTTCTCCGGGTGGTCCGCTGTATCCGACTAGAACTGTCCGTCATGCCGCCTGGGACGCATTAGACTTGCTTTTTCCCGTTGGACGATATTTTAGGCATCTCATAAGTCTTTTCTTCAGATTACTATATCCATGGTATTGGCCCTCCTCATGTTGGAACTTCGTGGTTTCTTGTGTGAAGGCAGTACTTCTGTATTTGTGGATGTTCATCCTTTCTTTATGGGAGAAGTTCACCAAGCCAAAAACTTTGTAG 2421 0.4374 MHKLPGCQRVVLVATNGGPLHVAVRNFNACFPLLYFIVTRTVGVFSITVVAAQELSLSEISRIQTMAANSSNGDHQTSTRPPPLPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDRLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELKRHDVTETLLVEVDQIYHLACPASPIFYKYNPVKFDRKRLSRQDFSSQTQKATLRPTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRVARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQSPGTQTRSFCYVSDLVDGLIRLMEGEHTGPINLGNPGYISTAKLALNFCPCQLINPNVEIKTVDNTPDDPRQRKPDITNAKELLALGVLIETFPMDDKGYDGMRSDHNTRLDLRRCFRQHLCRYPGHDPQAQSAPRRSGYLDALSQAIYKKLQRAMTSSSQRRNLLQELFADIALEVDDRAKDIIFGKDEDVISPSNIGDGLLCFYDVLADYFVRMPSSGKPILDLIVQLWSQSFASHIFALLFHKWLFEVQLDNPEVLLRYSSALVQGATNVFWIDIQTNTRRFQSLFHYLLEDVALDNSRLNKIPIQAQRDMYLLLSRFILFYNSADKMESFLKQCPDFPNAILIGGPADIFVTELTDQLQKLKVEPVLLHYLKEIRVLQGMELRLTTSTRLKTCLYSFTSPGGPLYPTRTVRHAAWDALDLLFPVGRYFRHLISLFFRLLYPWYWPSSCWNFVVSCVKAVLLYLWMFILSLWEKFTKPKTL 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0147 806 Pfam NAD dependent epimerase/dehydratase family 206 356 IPR001509 -
Lele32g0147 806 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 93 406 IPR036291 -
Lele32g0147 806 FunFam UDP-glucuronic acid decarboxylase 1 201 428 - -
Lele32g0147 806 Pfam GDP-mannose 4,6 dehydratase 101 172 IPR016040 -
Lele32g0147 806 Gene3D - 97 410 - -
Lele32g0147 806 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 72 407 IPR044516 GO:0042732|GO:0048040|GO:0070403
Lele32g0147 806 CDD UGD_SDR_e 98 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0147 Lele-ChrLele32 842003 852984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0147 95 346 Miscellaneous Gene Families AT1G02000 23.134 4.61e-09 57.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0158 29 875737 881439 Lele32g0147 32 842003 852984 hybridization
Lele30g1251 30 15131187 15135503 Lele32g0147 32 842003 852984 hybridization