Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0125 ATGAAAGAAGGAAAATCGATTAAAGTCGATCATCAGCAACATCACCAGAATAGTCACCTCTCGCCTTCCAAGTTCGCTAAATTTCTTGATCCTGAAGCTTCGTGGGATAAGGATCAATTGGGAGATGTTTTACATTGGATTCGACAAGCCCTTGGTCTTGCGTTTGGATTATTGTGGGGTGCCGTACCTTTGGTTGGGGGAATATGGTTTATCCTTTTTTTGGCGATATCCTCTGGGATCATATATGGTTATTATGCAGTAATATTAAAGGTTGACGAGGAAGAGTTTGGCGGTCATGGTGCACTCCTTCAAGAGGGTCTTTTTGCTTCTATAACTCTCTTCCTGGTAATTTGTTCTTTCGTGGATTCTAGTTTACAGTTTAGCACACTTTTGATTGGCAGGGCATTGGAGAGCATGCACAAATCAGCTTCTGGTTTCCGTGGAAGTTTTGTCTTGCAACGTAAGCTAAGCTTCACTCAATTTGGAACTTCTCACGTGGTTTACTGGTTCTGTTGTATCTCGGACTTCCTTACCTATTTAGCAATAGGTGATCATAATAAAGATGAAATGTAA 573 0.4101 MKEGKSIKVDHQQHHQNSHLSPSKFAKFLDPEASWDKDQLGDVLHWIRQALGLAFGLLWGAVPLVGGIWFILFLAISSGIIYGYYAVILKVDEEEFGGHGALLQEGLFASITLFLVICSFVDSSLQFSTLLIGRALESMHKSASGFRGSFVLQRKLSFTQFGTSHVVYWFCCISDFLTYLAIGDHNKDEM 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0125 190 PANTHER PROTEIN C20ORF24 RAB5-INTERACTING PROTEIN 2 124 IPR010742 GO:0097250
Lele32g0125 190 MobiDBLite consensus disorder prediction 1 17 - -
Lele32g0125 190 MobiDBLite consensus disorder prediction 1 20 - -
Lele32g0125 190 Pfam EMC6 43 116 IPR029008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0125 Lele-ChrLele32 708777 711459 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0131 29 732144 734779 Lele32g0125 32 708777 711459 hybridization
Lele30g1271 30 15270405 15272835 Lele32g0125 32 708777 711459 hybridization