Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1506 ATGATGTCCCGGATCCTCCCCAAGGCCTCCTCTACCATGGCCACCTTCCCTTGCTCTAGGGTGAGAAGTGGATTTTGCGTGTGGCCGGATTTGAGGCAACTTTGCTTCAGAAAAAGTCTTCTATATGGTTTTATGCGACTCTTTTCTACACCATTGAAGACATTACGTGGAGCTAGTCGATCGCTGAGAGTTAATCACTTCTGCAGTGTTGTGAATATGTCTTCCTCATTGCAAATTGAATTGGTACCGTGCCTCCGGGACAATTATGCATATCTCTTACATGATGTGGATACGGGGACAGTGGGTGTTGTTGATCCTTCTGAAGCTGTGCCTGTTATTGATGCTTTGACCAAGAAAAACCGTAATTTGACATACATACTGAACACTCACCATCATCATGACCACACTGGCGGGAATGTAGAGTTGAAAGCAAGGTATGGAGCGAAGGTGATTGGTGCAGGAGTAGACAAGGAAAGGATTCCTGGTATTGACATTTATTTGAATGATGGAGATACGTGGATGTTTGCAGGCCATGAGGTGCTTATAATGGAGACACCTGGTCATACCCGAGGTCACATAAGCTTCTATTTTCCTGGATCTGGAGCAATTTTTACTGGGGACACTTTGTTCAGCTTATCATGTGGCAAACTCTTTGAAGGAACCCCTGAGCAGATGTTCTCTTCTCTAAGAAAGATCATGTCATTGCCAGACGATACAAGTATATACTGTGGTCATGAATACACGTTGAGTAATTCAAAGTTTGCACTATCTATAGAACCTTCAAACAAAGAACTTCAGTCCTATGCTGCCCATGTAGCCCATCTTCGGAGTAAGGGCTCGCCCACGATTCCAACTACCCTGAAGATGGAAAAGGCTTGCAATCCATTCCTTCGTACGATGAGCACAGAAATTCGGCAGTCTTTAAACATTGCAGCCGCAGCAGATGACGCACACGCCTTAGGTGTCATCCGCCAAGCAAAAGATAATTTTTAG 993 0.4471 MMSRILPKASSTMATFPCSRVRSGFCVWPDLRQLCFRKSLLYGFMRLFSTPLKTLRGASRSLRVNHFCSVVNMSSSLQIELVPCLRDNYAYLLHDVDTGTVGVVDPSEAVPVIDALTKKNRNLTYILNTHHHHDHTGGNVELKARYGAKVIGAGVDKERIPGIDIYLNDGDTWMFAGHEVLIMETPGHTRGHISFYFPGSGAIFTGDTLFSLSCGKLFEGTPEQMFSSLRKIMSLPDDTSIYCGHEYTLSNSKFALSIEPSNKELQSYAAHVAHLRSKGSPTIPTTLKMEKACNPFLRTMSTEIRQSLNIAAAADDAHALGVIRQAKDNF 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1506 330 Gene3D - 77 330 IPR036866 -
Lele31g1506 330 Pfam Metallo-beta-lactamase superfamily 89 245 IPR001279 -
Lele31g1506 330 FunFam Hydroxyacylglutathione hydrolase, mitochondrial 77 330 - -
Lele31g1506 330 Pfam Hydroxyacylglutathione hydrolase C-terminus 246 330 IPR032282 -
Lele31g1506 330 SMART Lactamase_B_5a 87 245 IPR001279 -
Lele31g1506 330 PANTHER BETA LACTAMASE DOMAIN 71 330 - -
Lele31g1506 330 Hamap Hydroxyacylglutathione hydrolase [gloB]. 77 330 IPR017782 GO:0004416|GO:0019243
Lele31g1506 330 CDD hydroxyacylglutathione_hydrolase_MBL-fold 82 245 IPR035680 -
Lele31g1506 330 SUPERFAMILY Metallo-hydrolase/oxidoreductase 77 329 IPR036866 -
Lele31g1506 330 TIGRFAM GSH_gloB: hydroxyacylglutathione hydrolase 80 330 IPR017782 GO:0004416|GO:0019243
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1506 Lele-ChrLele31 20298354 20302356 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0038 29 253925 258007 Lele31g1506 31 20298354 20302356 hybridization