Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1454 ATGGCTGAGAAGGATAATTTATATTCACTGGGAGATGGGAGGAGAATACTAATTTTTAATTTCTTCAAGGATGCCAGACTAGTTTTCAAATCCGACAATCTTGGTCGGGAAATATTGTCTATCGCATTGCCTGCAGCACTGGCCTTGACAGCCGACCCTATTGCCTCACTGGTTGACACTGCATTCATTGGCCAAATAGGTCCTGTGGAGCTCGCTGCTGTAGGTGTTTCCATAGCACTATTCAATCAAGTATCAAGGATAGCGATATTCCCGCTTGTCAGTGTCACGACTTCTTTTGTGGCCGAGGAAGATACCCTCGGTGGAGTGACTTCTCAGGCAGAGGAGAATGATAACTTGGAAGAAGGTGCACCTATGGATGCTGAAACCAAAGAGTTTATACCACAAAAAGATACATGTGCAGATGTTCACGACTCAGATTCGATTGGTGGCGGCTTTAATATAGTTAATGCGGAGCCTAAGAGAAGGAACATCCCTTCAGCTTCATCAGCTCTTGTTATTGGTGGCATTCTTGGCATCATCCAGGCAATATTCCTCATTTCTGCTGCAAAACCTTTATTGAACTTCATGGGAGTAAAATCTGACTCCCCGATGCTGAACCCAGCTCAGCAGTACCTGAAATTGAGGTCCCTTGGTGCTCCTGCCGTGCTTCTTTCGTTAGCTATGCAGGGAGTCTTCCGAGGATTTAAAGACACTAGAACTCCTTTATATGCTACAGTGGCTGGAGATGTTACCAACATAGCACTAGATCCTCTATTCATGTTTGTATTCCGCCTGGGAGTCAGTGGTGCAGCCATTGCCCATGTTATATCTCAGTACCTAATTTCAGTCATACTCCTGTGGAGATTGATTGGACAAGTTGATCTAATCCCTCCTTCCAGGAAGCATCTACAATTTGATCGATTTCTAAAAAATGGTTTTCTATTATTAATGAGAGTCATTGCTGTAACATTCTGTGTGACACTTTCTGCATCACTAGCTGCACGGCAAGGATCAACATCTATGGCTGCATTTCAAGTCTGCTTGCAGGTTTGGTTGGCAACATCTCTTCTTGCTGATGGTCTTGCCGTTGCTGGGCAGGCAATTCTTGCTGGTGCATTTGCTAATAAGGATCATGACAGGGCTATAGCAACCGCATCACGAGTACTACAGATGGGCTTGGTTCTGGGATTAGGGCTTGCGATTTTCCTCGGAACAGGGCTTCATTTCGGAGCTAAATTATTTACAAAAGATATTAATGTCATCCACCTTATCAGTATTGGAACTCCGTTTGTTGCAGCCACTCAACCCATCAATTCTCTGGCATTTGTGTTTGATGGGGTTAACTTTGGGGCATCTGATTTTGCATATTCAGCCTTCTCAATGGTGGTGGTGGCAATTGTCAGCATCATTTGTCTACTTGTGTTGTCCTCTGCTGGTGGCTTCATTGGTATCTGGGTTGCTTTGACCCTTTATATGAGTCTCAGGGCATTTGCTGGCTTCTTGAGGATTGGAACGGGATCAGGGCCTTGGAGCTTCCTTAGGAGCTGA 1548 0.4483 MAEKDNLYSLGDGRRILIFNFFKDARLVFKSDNLGREILSIALPAALALTADPIASLVDTAFIGQIGPVELAAVGVSIALFNQVSRIAIFPLVSVTTSFVAEEDTLGGVTSQAEENDNLEEGAPMDAETKEFIPQKDTCADVHDSDSIGGGFNIVNAEPKRRNIPSASSALVIGGILGIIQAIFLISAAKPLLNFMGVKSDSPMLNPAQQYLKLRSLGAPAVLLSLAMQGVFRGFKDTRTPLYATVAGDVTNIALDPLFMFVFRLGVSGAAIAHVISQYLISVILLWRLIGQVDLIPPSRKHLQFDRFLKNGFLLLMRVIAVTFCVTLSASLAARQGSTSMAAFQVCLQVWLATSLLADGLAVAGQAILAGAFANKDHDRAIATASRVLQMGLVLGLGLAIFLGTGLHFGAKLFTKDINVIHLISIGTPFVAATQPINSLAFVFDGVNFGASDFAYSAFSMVVVAIVSIICLLVLSSAGGFIGIWVALTLYMSLRAFAGFLRIGTGSGPWSFLRS 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1454 515 CDD MATE_DinF_like 34 505 IPR044644 -
Lele31g1454 515 Pfam MatE 167 258 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lele31g1454 515 Pfam MatE 317 470 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lele31g1454 515 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 19 515 IPR044644 -
Lele31g1454 515 TIGRFAM matE: MATE efflux family protein 44 485 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1454 Lele-ChrLele31 19986690 19990198 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0094 29 554427 558056 Lele31g1454 31 19986690 19990198 hybridization