Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1422 ATGAAAGAAGGAAAATCGGTCAATCATCAGCAACAGCCCCAGAATGGTCACCTCTCGCCTTCCAAATTCGCTAAATTGCTTGATCCTGAAGCTTCGTGGGATAAGGATCAATTGGGAGATGTTTTACATTGGATTCGACAAGCCCTTGGCCTTGCGTTTGGATTATTGTGGGGTGCCGTACCTTTGGTCGGGGGAATATGGTTTATCCTTTTTTTGGCGATATCCTCTGGGATCATATATGGTTATTATGCAGTAATATTAAAGGTTGACGAGGAAGAGTTTGGCGGTCATGGTGCACTGCTTCAAGAGGGTCTTTTTGCTTCTATAACTCTCTTCCTGCTCTCGTGGATTCTAGTTTACAGTTTAGCACACTTCTGA 378 0.4392 MKEGKSVNHQQQPQNGHLSPSKFAKLLDPEASWDKDQLGDVLHWIRQALGLAFGLLWGAVPLVGGIWFILFLAISSGIIYGYYAVILKVDEEEFGGHGALLQEGLFASITLFLLSWILVYSLAHF 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1422 125 PANTHER PROTEIN C20ORF24 RAB5-INTERACTING PROTEIN 1 125 IPR010742 GO:0097250
Lele31g1422 125 Pfam EMC6 41 120 IPR029008 -
Lele31g1422 125 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1422 Lele-ChrLele31 19825740 19827899 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0131 29 732144 734779 Lele31g1422 31 19825740 19827899 hybridization
Lele30g1271 30 15270405 15272835 Lele31g1422 31 19825740 19827899 hybridization