Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1275 ATGATTTCCTATGAGCAAGATCCAGATGTTGTACGATGGGGCCTGCAACTATTTGATGCTAGTCCATATCCTAATTGCAGATATTGTGGTGCTGTTACTCAAGATAATACAGATTGTTATCATGGGCACTATTTTAGGGAAGAGGATTATAATAATGATTTTACCAGCATAGACAATGATGAAGTAATGGTGCATGCTCTTCAGCAACAATTTTCACAACTTGCAGTGACTGAAGCCTCTGAATCTTCTTATGATTGGTCAGAAAATATGCTGCCATCCAATTCATTGCAAGAGTGGCCCAGTCATCCAATGGGTAGCTATGAACAGCAAAATGATCAGGAAGAGGCAGATGATGCGGAACCTTCTAGTTCGTATTCTAGCTCTGACAAGAACTCATATTGTGGGGATCAATGGTTTTATTCATTGGAGCAGATTGATGAATATGCTCTTGATGGAGAAGTGGGGAAAAGACTGAATCAAATGGTTCCAATTCCGCTTTATGAGTTGGTTGAGTCCAAAGTTGAAGGGGATGGAAACTGTCAGTTTCGCGCACTATCAGATCAAATCTATCGAACGCCTGAGCACCATAAATTTGTGAGAGAACAAGTAGTAAATCAGCTGAAGTCATACCCAGATATATACGAGGGATATGTTCCAATGGCTTATGCAGACTATTTGGATAAAATGGCCAAGAATGGTGAGTGGGGGGACCATGTGACCTTGCAAGCTGCCGCAGATTCTTATGGAGTTAAAATATTTGTCATCACATCTTTCAAGGATACTTGCTACATTGAGATTCTTCCAAATTTTGAAAGGTCAAAACGAGTTCGGGGGAACGTTGCAATATCAATTGTCAAGGTCCGCAGAACGAGGAGTGATTTCGACCATCTCTTTTGCTTCCAGTCAGAGCTTTGGTCAAGAACAACTTGCGCTCGATTGCTTTATTGCTTTGATGATGGCAGGGTCACTGGGTGGCAATCTATCATCTTATTTGACGCATACACTGCTTGCTTGTTTCGATTCCTAAAATATTGGCAATTGGATGATGACCAAGTGCTAGGCAATCCAAAGGCGAAATCCGTCATTTCCCGCCCTGAAAAAATTTATACGTGGAGAGTGGAAACTTGTGCTAGCCCAGTTCATGTCTTTTGCTGGCAGTGGAAGTTAGCGTTTGTTTTTCATTTATGTTATCGTGAGCGTGATCCTTCTCTGAGTGTTTGTGACTTTGTGCTATACGAATGTGCAGGGATGGCTGAGGTTGGGAAAGTTCTGTATATCGTGGTGGTTGACGAGGATGAGCAGAAAGAGAAAGGCAAGGAGTCATTCTGGTATACACGCCCTGTTCTGCAGAGCACTTTGCAGCTCATAGGATGTAAAGCGCGACATGCCTTCAAGATCAGTAAAAGGGTGTTTGAACTCACAAGGGGTGAAAGTTTTCCAGATACTTTGCTGCCTGAAGGAATTTTAACATCGGGAATTGATGCAGCTGGGGAAAATTTTGAGATAGACGGTGGTCATTATGCTGGTGCTAAAGCAGATGTACAGAACAACTCATTCTTCGGGAAATATAATAGAACTAAGAGTGCACTATATGAGTTGTACAAAAGGCGCACAACTGCAGTTGTTTGCAGAGAAACTTTTTTAGATATTGTCTGTGCGGCTCTGGCTGAGTATAAGTATGTAGGACCCAACCAGAGAGCAGATCTGGTTCTAGCATGCAGAGCAACACTTCAAAAACCACCTGTATTCTTTAGATGTTGTGTCACAATGTTCATTTTGTATCCTGTTTCCAGGTTAGGTAGTAGGCTGGGAATCACGACAGTGGTGTCAACTGACTCCATTAGGCACATGATGAGAAGTTTTGTCGATGAGAAGGAAAATCCCTTGTTGTGGGCTTCTACCTACCATGCAGGCGAGTGCTTGGATCCTGTTGCTGTTGCTGAAGCAAAGGCTAGAAGGAAAGCCAAAAAGTTGGCTGGTGTGTCACATTCACTTCCCAAGGGTGAAGTAACTGAGGGTGATAATTCTAGGAAATCGAATGAGCTGATGCCAGATGTTGGTCCTACAAACACAGAACTTCTAAATCCAAAACAAATGGCTATTGAAGGATTTAAGGCTCAGAGTGAGATGGTGATTGACAGTCTTGATAGGTTAATCACGGCCTGGGAAGAACGGAAAGAGTCCGTTGTTGTTGAGGGTGTTCACTTGAGCCTCAACTTTGTTGTATGTCAAATTTTCTTTATCGGGCGTGAAGCTGGGGAACTACTGTATGATCCTGCTAGAAATACTGTCACTGTTGTTGATGAGGAATATAGAAATCAACGTGCTGCCAATTCTTTGAGCTCGAAAGGAATGTTTCAGTTGATCCAGAGACGAGGTTCTTCAAGGCATCTGATGGCCCTTGTTAATACAGATGGGTCTGTGGCAAAGGTTTGGCCTGTTAATTCCGTTGACAGGGATGGGAACCCAGTATGGGGTGATGGATCAGTGCATGGAATAGGTTGTCCAATGTATGAACCTTTAATGATTGGCAAAGCGGAACCTGTAAATCTTCAGTTTGGTTTGTACGGGATCAGTGCATGGCCTAGTGATGGTGGTACTAGTGGTGCTGGAAGTGTTGATGAGTCAAGGGCCGATGGGACTGACACTGGCAGTAGATATTTGTCCTCTTGCTGCAGCTCACCGAGGTTGTCTGATGGACATGCAAAGGAGCTTATGGAGGAGCAGTCAGTGCATGGCAGTGATGAGGATCCCCCTGAGGTGGGCAGCGACGAGGATTTCAGTGATGATGGTGACACACGAGTCCATGATGAGGTAGGCTCAGTGGATGAGGAATCTACAAAGTCTGATGAGGAGTATGATGATTTGGCAATGCAAGACATGCCAAAAAATGGCTATTGGTCTGGCGACGACGAAGTGTCTAAAGAGAAGCTGGGTCATGGGAACCATAGAACTAGAGCCCAAGAAAATGAGGATTGTCAAAACCATGGTCTCTACCTCAAAACTAGAAGTGAGCCAGTCCCTGAGTCCTTGTGCTCTTATTCGTCTCTGTTCATGGAAAACAGTGAGAGGAGATTACATCCTGGCAAAGTCAAATTGAGAAAACGGTCTCTTAGTATTCCTGCAATGAAAAAGAATGGTTCCGCAATAATTGATCCTATCCTTTCTGGGGCTCCTCAAAGGTAG 3186 0.4375 MISYEQDPDVVRWGLQLFDASPYPNCRYCGAVTQDNTDCYHGHYFREEDYNNDFTSIDNDEVMVHALQQQFSQLAVTEASESSYDWSENMLPSNSLQEWPSHPMGSYEQQNDQEEADDAEPSSSYSSSDKNSYCGDQWFYSLEQIDEYALDGEVGKRLNQMVPIPLYELVESKVEGDGNCQFRALSDQIYRTPEHHKFVREQVVNQLKSYPDIYEGYVPMAYADYLDKMAKNGEWGDHVTLQAAADSYGVKIFVITSFKDTCYIEILPNFERSKRVRGNVAISIVKVRRTRSDFDHLFCFQSELWSRTTCARLLYCFDDGRVTGWQSIILFDAYTACLFRFLKYWQLDDDQVLGNPKAKSVISRPEKIYTWRVETCASPVHVFCWQWKLAFVFHLCYRERDPSLSVCDFVLYECAGMAEVGKVLYIVVVDEDEQKEKGKESFWYTRPVLQSTLQLIGCKARHAFKISKRVFELTRGESFPDTLLPEGILTSGIDAAGENFEIDGGHYAGAKADVQNNSFFGKYNRTKSALYELYKRRTTAVVCRETFLDIVCAALAEYKYVGPNQRADLVLACRATLQKPPVFFRCCVTMFILYPVSRLGSRLGITTVVSTDSIRHMMRSFVDEKENPLLWASTYHAGECLDPVAVAEAKARRKAKKLAGVSHSLPKGEVTEGDNSRKSNELMPDVGPTNTELLNPKQMAIEGFKAQSEMVIDSLDRLITAWEERKESVVVEGVHLSLNFVVCQIFFIGREAGELLYDPARNTVTVVDEEYRNQRAANSLSSKGMFQLIQRRGSSRHLMALVNTDGSVAKVWPVNSVDRDGNPVWGDGSVHGIGCPMYEPLMIGKAEPVNLQFGLYGISAWPSDGGTSGAGSVDESRADGTDTGSRYLSSCCSSPRLSDGHAKELMEEQSVHGSDEDPPEVGSDEDFSDDGDTRVHDEVGSVDEESTKSDEEYDDLAMQDMPKNGYWSGDDEVSKEKLGHGNHRTRAQENEDCQNHGLYLKTRSEPVPESLCSYSSLFMENSERRLHPGKVKLRKRSLSIPAMKKNGSAIIDPILSGAPQR 1061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1275 1061 PANTHER P-LOOP NTPASE DOMAIN-CONTAINING PROTEIN LPA1 HOMOLOG 1 750 968 - -
Lele31g1275 1061 ProSiteProfiles OTU domain profile. 169 276 IPR003323 -
Lele31g1275 1061 MobiDBLite consensus disorder prediction 900 918 - -
Lele31g1275 1061 MobiDBLite consensus disorder prediction 95 110 - -
Lele31g1275 1061 MobiDBLite consensus disorder prediction 865 950 - -
Lele31g1275 1061 MobiDBLite consensus disorder prediction 969 991 - -
Lele31g1275 1061 SUPERFAMILY Cysteine proteinases 145 266 IPR038765 -
Lele31g1275 1061 MobiDBLite consensus disorder prediction 665 691 - -
Lele31g1275 1061 MobiDBLite consensus disorder prediction 95 131 - -
Lele31g1275 1061 MobiDBLite consensus disorder prediction 882 896 - -
Lele31g1275 1061 Pfam OTU-like cysteine protease 176 261 IPR003323 -
Lele31g1275 1061 MobiDBLite consensus disorder prediction 928 943 - -
Lele31g1275 1061 Gene3D - 161 285 - -
Lele31g1275 1061 MobiDBLite consensus disorder prediction 964 994 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1275 Lele-ChrLele31 18905485 18919834 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0275 29 1629390 1634392 Lele31g1275 31 18905485 18919834 hybridization
Lele30g1140 30 14350525 14355468 Lele31g1275 31 18905485 18919834 hybridization