Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1213 ATGCAGTCTCTTTCCTCTCATCCTTCCCATTCTCTTAACTACCTCTTGCAGACCCGCCCTTGGGCTCATCGGGTTAGTCCGACCCGATTCTCTGTTAAATGCGCTTATGGCTTCGAATCCGCTGGATTTCATTCCGGCTTCGGCTCATCTCGGGCTGACTGGCAGAGTTCCTGCGCCATCTTAGCTAGTAAGGTTGTTTCTCAGGAACAATCCTCCACCGATTCCAACGGAGGCACGGCTGACCACGTCGCCGCCATTAACGGCCATAAGGCCGCCGTCACGGATCTCAACCTCGTCCACATCGGTAACTTAGGAGGCACCAGCGACATTAACAAGCCACTTCCGCCGAAGCCGCTCACTATTTCGGATCTCTCTCCTGCTCCGATGCATGGCTCACAGCTCCGTGTGGCCTACCAGGGTGTTCCCGGAGCATACTCCGAAGCGGCTGCCGGCAAGGCCTATCCGAACTGTGAAGCCATTCCTTGTGACCAATTCGAGGTAGCTTTCCAAGCCGTACAGCTCTGGATCGCCGATCGAGCAGTCCTTCCCGTGGAAAACTCTCTCGGCGGCTCGATCCACCGGAACTACGATCTCCTCCTCCGTCACCAGCTTCACATCGTCGGGGAGGTCCAACTTCCCGTGCACCACTGCCTTCTCGCGCTCCCGGGAGTTCGAAAGGAATATCTAACCCGCGTCATCTCGCATCCGCAAGCCCTCGCGCAGTGCGAGCACTCGCTAACCAAGCTCGGCCTCAACGTGGCACGCGAGGCCGTGGATGACACCGCCGGCGCGGCAGAATTCATCGGAACCAACAACCTACGCGACACGGCGGCAATCGCGAGTGCACGCGCGGCGGAGCTGTACGGATTGCAGGTCTTGGCTGATGGAATCCAGGACGACCCCAACAACGTGACCCGATTCGTGATGCTGGCCCGGGAACCCATAATTCCTCGGACGGATAGGCCCTTCAAGACAAGCATAGTGTTCGCGCACGATAAGGGGACGTCGGTACTGTTCAAGGTTCTATCGGCCTTCGCTTTCAGGAACATTAGCTTGACGAAGATTGAATCAAGACCTCATCGGAGCCGTCCGATTAGGGTGGTGGACGATGCGGATGTGGGGACGGCGAAGCACTTCGAGTATATGTTCTACGTTGATTTCGAAGCCTCCATGGCAGAGGTTAGGGCTCAGAACGCCTTAGCAGAGGTTCAGGAATTCACATCCTTCTTGAGGGTTTTGGGTAGCTATCCTATGGACATGACTCCATGGAGCCCCTCTTCTTCCTCTTGTCCCATGGGAGATTAG 1305 0.5663 MQSLSSHPSHSLNYLLQTRPWAHRVSPTRFSVKCAYGFESAGFHSGFGSSRADWQSSCAILASKVVSQEQSSTDSNGGTADHVAAINGHKAAVTDLNLVHIGNLGGTSDINKPLPPKPLTISDLSPAPMHGSQLRVAYQGVPGAYSEAAAGKAYPNCEAIPCDQFEVAFQAVQLWIADRAVLPVENSLGGSIHRNYDLLLRHQLHIVGEVQLPVHHCLLALPGVRKEYLTRVISHPQALAQCEHSLTKLGLNVAREAVDDTAGAAEFIGTNNLRDTAAIASARAAELYGLQVLADGIQDDPNNVTRFVMLAREPIIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRSRPIRVVDDADVGTAKHFEYMFYVDFEASMAEVRAQNALAEVQEFTSFLRVLGSYPMDMTPWSPSSSSCPMGD 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1213 434 PANTHER PREPHENATE DEHYDRATASE P PROTEIN 35 426 - -
Lele31g1213 434 ProSitePatterns Prephenate dehydratase signature 2. 352 359 IPR018528 GO:0004664|GO:0009094
Lele31g1213 434 CDD ACT_CM-PDT 324 417 - -
Lele31g1213 434 FunFam Arogenate dehydratase 218 300 - -
Lele31g1213 434 ProSiteProfiles Prephenate dehydratase domain profile. 135 312 IPR001086 GO:0004664|GO:0009094
Lele31g1213 434 Gene3D - 130 218 - -
Lele31g1213 434 ProSiteProfiles ACT domain profile. 326 417 IPR002912 -
Lele31g1213 434 CDD PBP2_Ct-PDT_like 135 314 - -
Lele31g1213 434 Gene3D - 219 300 - -
Lele31g1213 434 Pfam Prephenate dehydratase 136 314 IPR001086 GO:0004664|GO:0009094
Lele31g1213 434 Gene3D - 319 420 - -
Lele31g1213 434 FunFam Arogenate dehydratase 130 217 - -
Lele31g1213 434 SUPERFAMILY ACT-like 307 419 IPR045865 -
Lele31g1213 434 ProSitePatterns Prephenate dehydratase signature 1. 288 310 IPR018528 GO:0004664|GO:0009094
Lele31g1213 434 SUPERFAMILY Periplasmic binding protein-like II 135 318 - -
Lele31g1213 434 FunFam Arogenate dehydratase 319 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1213 Lele-ChrLele31 18494302 18495606 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0327 29 1994639 1995943 Lele31g1213 31 18494302 18495606 hybridization
Lele30g1075 30 13967734 13969038 Lele31g1213 31 18494302 18495606 hybridization