Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1157 ATGTATTACAAGGATACGCCCATCTTTACCAAAGTCCATCGCACCCATACCCAAACGAACTGGTCCCTCTGTTCACCTCGGTGGGTCGACCTGCTCGACCAGAAAGAATTTGTGCCGAATCCGGTTAAATACGTGCCGAAAGACGAGGAGTGGATGAAGCACTTGGAGGATAATCTGAGTTTGAGCTGGATCCTGATCGACCCGGCCCGGAAGAGATCGGCGAATCTATCGAGCAGGAGGCCGGTTTCAGTGCAGCGGCACTGGTTGACGAGAGACCTGGAGATACTGTACGTGGTGACGGTGGCGCGTGGTGAGATGTCATCGGAGTGGTTGCAGTGTACGACAAAGGTCACGTGCGGCGGGAAGGCCGGAGGGGAGATGAACGTGAGGGGAGTGAGCTTGACGGTGGGGGACATGGAGGGTAAAAACACGACGGGGAAGGAGAGTTTGGGGATTCTCCAAAGGGCGATGGAAAATGCGGAGAGGAAAACAGTGAGCCAAGAGGAAGCAAAAAGTAGATATGAGAAGTTCCTGGGGATGAAGAAACAGAGGAGAGAAAGGAAACAGAGGATAGAGAAAGCGATGGACATGATCTCAATTATGGTTATCATCGTTGTTTTGTATTCTTTTGCGGATTTATGCTGTTCTAAGTTGCATAGCAACTGTGACAAAGAAAATCCCAGAGCGAAAATGGCAACCACCTTCGGCGCCCCATCGACAGTGGTCGGACTCGTCAGCACATCACCTTTGTCCACCCGACGCCTCACCTCAGGGTTTCTGAATTCGCCGGTGAAGGCAAGGAATCCTCTGAGAGTAGCGGGTGCCTCAGGAGGGAGGGTTACTTGCTTCGAGAGGAATTGGCTGAGGACGGATTTCAACGTGATCGGGTTCGGGTTGATTGGGTGGTTAGCTCCATCAAGCATACCCGCGATCAACGGGAAGAGTCTCACTGGGCTCTTCTTTGAGAGCATCGGAGCTGAGCTCGCTCACTTCCCTACCCCCCCTGCCCTCACTTCACAGTTCTGGCTATGGTTGGTGACGTGGCACCTGGGGCTGTTCCTGTGCCTCACTTTTGGGCAAATTGGCTTCAAGGGAAGGACTGAAGACTACTTTTGA 1116 0.5278 MYYKDTPIFTKVHRTHTQTNWSLCSPRWVDLLDQKEFVPNPVKYVPKDEEWMKHLEDNLSLSWILIDPARKRSANLSSRRPVSVQRHWLTRDLEILYVVTVARGEMSSEWLQCTTKVTCGGKAGGEMNVRGVSLTVGDMEGKNTTGKESLGILQRAMENAERKTVSQEEAKSRYEKFLGMKKQRRERKQRIEKAMDMISIMVIIVVLYSFADLCCSKLHSNCDKENPRAKMATTFGAPSTVVGLVSTSPLSTRRLTSGFLNSPVKARNPLRVAGASGGRVTCFERNWLRTDFNVIGFGLIGWLAPSSIPAINGKSLTGLFFESIGAELAHFPTPPALTSQFWLWLVTWHLGLFLCLTFGQIGFKGRTEDYF 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1157 371 PANTHER PHOTOSYSTEM I SUBUNIT O 231 371 IPR017498 -
Lele31g1157 371 TIGRFAM psaOeuk: photosystem I protein PsaO 293 371 IPR017498 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1157 Lele-ChrLele31 18147690 18150800 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0384 29 2331439 2332122 Lele31g1157 31 18147690 18150800 hybridization
Lele30g1026 30 13642933 13643955 Lele31g1157 31 18147690 18150800 hybridization