Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1119 ATGGCGGAAACCCTAAGTCCTAATCCTACGATTGGTCAGAAGCAGCGGCTCCCTACGTCTGCTCGCATCCAATCTCCTACAAGTCCTTTTTTCTTGGGCTCCAACGACGACCAGCTCGAACGCGCTCAGGCCCGCGCTGCTGCCATCCGCCGCAAGGCCGTTGCTGCAAAATTGCAGTCACAATCTTTAGATGACAATTCTGACCGCTGTCTCAACAAGCAGCAGATTTTTGATTTGCTCCAGAACTGCATCAAGCTTGCCAGTGAAAATAAAATTAATCAGAAAAATACATGGGAGCTGAATTTGATTGATCACCTTACTGATATCATTAAAGTTGAAGAAGAAAATGATGTGGAGACGAATTTCCAAAAGGCAAGTTGCACACTTGAAGCTGGAGTCAAGATTTATGCGTTAAGGGTAGATTCAGTGCATTCTGAAGCTTATAAAGTCCTTGGCGGAATGAATAGAGCAGGCCAAGAATCTGAACAAGATACTGCTCTGGAGAACGATAATGTTAAAAAAGGACAAGAAGGTGGCAAAAAACAGATGGACACAAAGCTATCCCCTTTGTCAACACTGGAATCGTCTTTTGAGGTTCTAAATGTGAAGAAGTTTGATGCCGCATTCGCCGTGGATCCACTCTATCACCAGACATCAGCACAATTCGACGAAGGTGGAGCGAAGGGTCTTTTAATGAATAATCTTAGTGTATATGGTAAATGTAGGGTCCTCTTTGATTCACAGGAAGTTCCTGGAAAGTGCATGAGAAGTGAGAATCAAGATGATATTCTAGATACGATTGATCTTTCTTTTGCCAAAGAATGTGTCGAGCAGATGGTATTGAACATGCGCATGAAGGATGAAATTTCCCCAACTCTCAGGACTATAGTAAATCAATTTGATGAAAATAATAGAAGGCCATCAGATTTTCAATTTTCTTGTCAGAAGCCACCAGAAGAGTTTGGTGACGCCAATGATTGTGAAATTGATATTGACAGAGAAGAATATGGAAACTGCGCGTCTTGGATTGATGACCATGATGACCAAACAGTTGATGATCTAGGCTCAAATGATGCTAATGCAAGCTTCCCTAGTTATGCTCAGGAAAATGAATCATTTCCTCCTCAAGATCCTGATGTTGAGGACAAATTTGAAAACGTCGATGACTACTTATTCTTAAGTCTGGGTTTTAGTTCAAAGCACAATGCATGGGCAGGCCCTGATCATTGGAAGTACAGAAAAGCCAAAGGTGCCGAGGTTAATCCTGAGTCAGAGGATGGGTCAACCCTAAAACCTAAGCAGTCAAGAAGTAAAAGGCAGGCAGAAGTTGATTTAGATTTCGCGAATTTTCTTCATAAAGAAATGGCAGATATCTTTTCTCCGCCCAAGAATCCCAAATCATTACTGCTCCCTGAAAATAGACCGCTTTGTAATGCAAAACTTCCGGAGGATTGCCACTATCAGCCGCAGAATCTTGTCAAGTTATTTATTCTACCTAATGTGAAGTGCCTTGGGAGGAGAGTGAAAAAATTCTCAGGTGTATTTGCGGAGGGAGCTGATGAACAATGCAATGCGTACGAGTCGTTCCCTTCATACGAAGATGGAAGTATTTGTGGCGGTGACTATGGGGATGTTCATAGCGACCCTGAGGACTCTACCACACTTGTTTCTCAGCCTCGTCAGGTCAATAAAATCGAAGTTGAGTATGACAAAACTTCGAAACAAGTTGATGTTCAGGCTCTAAAAAACACTCTTTGGGATCATATTCAAGAAAACGATCAGCTGCCACTTCAGGAGCAGAAGGACGTGGTATCTTTCAGGGAAATACTAGCCAACTTCCCTGACGATTGCAAAGCTGCGGCCACTATTAGGGACATCTCTCCTCATTTGTGTTTCATATGTCTATTGCATTTAGCAAATGAGAATGGGCTAAGCATTCAGAGCAGCCCGAATTTGGATGATCTTGGCATATGCCTTCCTCGTGTAGCTGCAGCTAGAAGTGGAATGCTTTAG 2013 0.4277 MAETLSPNPTIGQKQRLPTSARIQSPTSPFFLGSNDDQLERAQARAAAIRRKAVAAKLQSQSLDDNSDRCLNKQQIFDLLQNCIKLASENKINQKNTWELNLIDHLTDIIKVEEENDVETNFQKASCTLEAGVKIYALRVDSVHSEAYKVLGGMNRAGQESEQDTALENDNVKKGQEGGKKQMDTKLSPLSTLESSFEVLNVKKFDAAFAVDPLYHQTSAQFDEGGAKGLLMNNLSVYGKCRVLFDSQEVPGKCMRSENQDDILDTIDLSFAKECVEQMVLNMRMKDEISPTLRTIVNQFDENNRRPSDFQFSCQKPPEEFGDANDCEIDIDREEYGNCASWIDDHDDQTVDDLGSNDANASFPSYAQENESFPPQDPDVEDKFENVDDYLFLSLGFSSKHNAWAGPDHWKYRKAKGAEVNPESEDGSTLKPKQSRSKRQAEVDLDFANFLHKEMADIFSPPKNPKSLLLPENRPLCNAKLPEDCHYQPQNLVKLFILPNVKCLGRRVKKFSGVFAEGADEQCNAYESFPSYEDGSICGGDYGDVHSDPEDSTTLVSQPRQVNKIEVEYDKTSKQVDVQALKNTLWDHIQENDQLPLQEQKDVVSFREILANFPDDCKAAATIRDISPHLCFICLLHLANENGLSIQSSPNLDDLGICLPRVAAARSGML 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1119 670 PANTHER CONDENSIN COMPLEX SUBUNIT 2 17 660 IPR022816 GO:0000796|GO:0007076
Lele31g1119 670 MobiDBLite consensus disorder prediction 347 379 - -
Lele31g1119 670 MobiDBLite consensus disorder prediction 1 28 - -
Lele31g1119 670 MobiDBLite consensus disorder prediction 416 440 - -
Lele31g1119 670 MobiDBLite consensus disorder prediction 155 184 - -
Lele31g1119 670 MobiDBLite consensus disorder prediction 354 372 - -
Lele31g1119 670 MobiDBLite consensus disorder prediction 166 181 - -
Lele31g1119 670 Pfam Condensin complex subunit 2 551 657 IPR022816 GO:0000796|GO:0007076
Lele31g1119 670 Pfam Condensin complex subunit 2 42 510 IPR022816 GO:0000796|GO:0007076
Lele31g1119 670 Coils Coil 39 59 - -
Lele31g1119 670 PIRSF Condensin_H 271 550 IPR022816 GO:0000796|GO:0007076
Lele31g1119 670 PIRSF Condensin_H 1 275 IPR022816 GO:0000796|GO:0007076
Lele31g1119 670 PIRSF Condensin_H 509 660 IPR022816 GO:0000796|GO:0007076
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1119 Lele-ChrLele31 17852783 17856802 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0428 29 2626051 2630610 Lele31g1119 31 17852783 17856802 hybridization
Lele30g0980 30 13338007 13342293 Lele31g1119 31 17852783 17856802 hybridization