Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1353 ATGGCAAATCTCGTTCCCGGGGTTCTTCTCAAGCTTCTGCAGCACATGAACACCGACGTCAAAGTTGCCGGTGAGCATAGGTCTTCTCTCCTGCAAGTCGTGAGCATTGTTCCGGCTCTTGCGGGCGGCGAGCTGTTCCCAAATCAAGGTTTTTATCTCAAGGTCTCAGATTCATCTCACGCCACCTACGTTTCTCTCCCCGACGAGCACGACGATCTCATTCTCAGCGACAAGATTCAGTTGGGTCAGTTCATTTTCGTTGATCGTCTGGAAGCTGCTTCGCCCGTTCCGATTCTTCGTGGAGTTAGGCCTGTTCCTGGGAGACACGCTTGTGTAGGAAGCCCTGAAGACCTTGTCGCAACTCATTCTCCTGGGTTCCTTAGTAATAATAACGGTAATTCCACAGGGAGATCGAAATCTCCAAAAAGGGAGAAAGTAAGATCGAATGATAATGTGAAGGAAGAACATTTGGAGAAAAAAACTGCGCTGTTTAGCAGAGGCAAAACACAGCCAACAAAAGCAGAGCTAAAAGTGGATGTGAAGAAGGAGACCTTAACAAGATTGAAGTCCTTGAATTCACGGTCGATTCCTTCGTCGCCGACCAGCTGCTATTCTCTGCCTTCCTCTTTTGAGAAATTTGCGAACGGGGTGAAACAGCAGGCTAAGATTAAGGGAGTGGAGAAGCTGGCAGCTAAAGTGGGAGTGGTTGAGACCGGGAAGGCCATCCGTGGGGGTAGTCCCACTCCAACAGGGAAGAAAATTGGAGTGGGAAACCCAATCAGAAGTTTGGTTCAGGGCGTGGAGTTTGGGGCAAAGGCTCTGCGTAAGAGCTGGGAAGGGAATCTGGAAGTCAAGAGTAGAGATAATTCAAAATTGAGGGCTGCCAAGTGTGATCCTAAGCATGAAGCTCGTAGTTCAGCTCCGAGAAAAAGCACATCAAGTGAAAAATTGCCATCTAAAGTGGATAGCAAGGCCCAAGCGACTTCGAAGCCTTCTAAGGAGGAACATAAGGCTCAACCGTCTGTGAAGAAGGTTATTGCTAATGGAGCCCCGGAGAGCCAAGAAAAGTCAAGTAAACCAAGAACTTCCCTAGGAAGGAAATCATCAGAATTTTCTAGCACCGGGATCCCGGGAAACTTGGTTAAATTTTCTCTGAATAGTAAAAAAGTGACAGATGCAAGTGTTCGATGGGCTTCACTCCCATCGTCCCTTGCAAAGCTTGGAAAGGAAGTTATGAAGCAAAGAGACGCAGCACAGATGGCAGCAATTGAGGCCATGCAAGAGGCTTCTGCTGCTGAGAGTTTGCTTCAATGTCTAAGTATATACTCTGAGCTAAGTAATTCTGCAAAGGAACACAACCCACAGCCTGCAGTAGAGCAGTTTTTGAGTCTTCGTGCAAGCCTAAATGATGCTCTCGTAGTTGCTGACTCCCTATCGAAAACCATTCCTGATGGTTCTTCTGCAGATTATGAAAAGAACACAATGGAAGAAGCATTAAAAATCACCTTAGACAGGCAAAAACATGCAACTTCCTGGGTTCAGGCTGCCTTGGCCACCAATTTATCATCCTTTGCAGTCTTCACCAGAGAACCTCAATTGTCCAAGCTTCCAGCTTCAAGTAATGGTCAACATCAAAAGACTATCTTGGGAAGTCATCCCATGTTAGTTCTAGAGAATGCCAGGGAAGATGCTTTTTCAAAACTTCAGGTAAAAACACGTTCCGTGGCCAATTCTAAACATGCCTCGCAAGGAACTCCTCGTCGAACAAGTGAGGGGTTAGCAAATGGACCAAAGCAGCTAGCTCAACCACCTCAACCTTGGGTTGAGGGAAATGGGCTTGATGAAGTGGTAAATTTAGCTGAAATGCTACAATCACGGTCCAGAGACTGGTTTTTGGGATTTGTGGAGAAATTCTTGGATACTGAAGGGGAGGCAACCCTGTCAGATAATGGCCAAATAGCCGGTATGTTGTCTCAGCTAAAGAGTGTAAACGATTGGTTAGATGAGATAGGGTCGAACAAGAATGAGGGAGAATCAGGCCAGATATCAGCAGAGACAATTGATCGATTGAGGAAGAAGATATATGAATATCTTCTAACACATGTTGAATCCGCGGCCGCCGCACTCAGTGCTGGATCACAATCATCACCTCGGATCCAGGCAACAGAGACTAAATCGAAAAGAATAGAAAGGAGTCTAAATGCAGTTAAAGGAAAAAATTGTGAAGGAGGGAGACGGTGGGAAGAAGCTTTCCAAGGAAACAGTAGTGTTGCTAGCCTACCAACTGCATCGTTGCCAACTCACATCCCACGTCCCTTCTTTTTAATTTCTCTTCTCCTCTTTCAGGCCATGATGTCCCGGATCCTCCCCAAGGCCTCCTCTGCCATGGCCACCTTCCCTTGCTCTAGGGTGAGAAGTGGGTTTTGCGTGTGGCCGGATGTGAGGCAACTTTGCTTCAGAAAAAGTCTTCTATATGGTTTTATGCGACTCTTTTCTACACCATTGAAGACATTACGTGGAGCTAGTCGATCACTGAGAGTTAATCAATTCTGCAGTGTAGTGAATATGTCTCCCTCATTGCAAATTGAATTGGTGCCTTGCCTCCGGGACAATTATGCATATCTCGTACATGATGTGGATACGGGAACAGTGGGTGTTGTTGATCCTTCTGAAGCTGTGCCTATTATTGATGCTTTGAGCAAGAAAAATCGTAATTTGACATACATACTGAACACTCACCATCATCTTGACCACACCGGTGGGAATGTAGAGTTGAAAGCAAGGTATGGAGCGAAGGTGATTGGTGCAGGAGCAGACAAGGAAAGGATTCCTGGTATTGACATTTATTTGAATGATGGGGATAAGTGGATGTTTGCAGGGCATGAGGTGATTATTATGGAGACGCCTGGTCATACCAGAGGTCACATAAGCTTCTATTTTCCTGGATCTGGAGCAATTTTTACTGGCGACACTTTGTTCAGCTTATCATGCGGCAAGCTCTTTGAAGGAACCCCTGAGCAGATGTTCTCTTCTCTAAGAAAGATCATGTCATTGCCAGACGATACAAGTATATACTGCGGTCATGAATACACGTTGAGTAATTCAAAGTTTGCGCTATCTATAGAACCATCAAACAAAGAACTTCAGTCCTATGCTGCCCATGTAGCCCATCTTCGGAGTAAGGGCTTGCCCACGATTCCAACTACCCTGAAGATGGAAAAGGCCTGCAATCCATTCCTTCGTACGATGAGCGCAGAAATTCGGCAGTCTTTAAACATTGCGGCCACAGCAGATGATGCACACACCTTAGGTGTCATTCGCCAAGCAAAAGATAATTTTTAG 3342 0.459 MANLVPGVLLKLLQHMNTDVKVAGEHRSSLLQVVSIVPALAGGELFPNQGFYLKVSDSSHATYVSLPDEHDDLILSDKIQLGQFIFVDRLEAASPVPILRGVRPVPGRHACVGSPEDLVATHSPGFLSNNNGNSTGRSKSPKREKVRSNDNVKEEHLEKKTALFSRGKTQPTKAELKVDVKKETLTRLKSLNSRSIPSSPTSCYSLPSSFEKFANGVKQQAKIKGVEKLAAKVGVVETGKAIRGGSPTPTGKKIGVGNPIRSLVQGVEFGAKALRKSWEGNLEVKSRDNSKLRAAKCDPKHEARSSAPRKSTSSEKLPSKVDSKAQATSKPSKEEHKAQPSVKKVIANGAPESQEKSSKPRTSLGRKSSEFSSTGIPGNLVKFSLNSKKVTDASVRWASLPSSLAKLGKEVMKQRDAAQMAAIEAMQEASAAESLLQCLSIYSELSNSAKEHNPQPAVEQFLSLRASLNDALVVADSLSKTIPDGSSADYEKNTMEEALKITLDRQKHATSWVQAALATNLSSFAVFTREPQLSKLPASSNGQHQKTILGSHPMLVLENAREDAFSKLQVKTRSVANSKHASQGTPRRTSEGLANGPKQLAQPPQPWVEGNGLDEVVNLAEMLQSRSRDWFLGFVEKFLDTEGEATLSDNGQIAGMLSQLKSVNDWLDEIGSNKNEGESGQISAETIDRLRKKIYEYLLTHVESAAAALSAGSQSSPRIQATETKSKRIERSLNAVKGKNCEGGRRWEEAFQGNSSVASLPTASLPTHIPRPFFLISLLLFQAMMSRILPKASSAMATFPCSRVRSGFCVWPDVRQLCFRKSLLYGFMRLFSTPLKTLRGASRSLRVNQFCSVVNMSPSLQIELVPCLRDNYAYLVHDVDTGTVGVVDPSEAVPIIDALSKKNRNLTYILNTHHHLDHTGGNVELKARYGAKVIGAGADKERIPGIDIYLNDGDKWMFAGHEVIIMETPGHTRGHISFYFPGSGAIFTGDTLFSLSCGKLFEGTPEQMFSSLRKIMSLPDDTSIYCGHEYTLSNSKFALSIEPSNKELQSYAAHVAHLRSKGLPTIPTTLKMEKACNPFLRTMSAEIRQSLNIAATADDAHTLGVIRQAKDNF 1113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1353 1113 SUPERFAMILY Metallo-hydrolase/oxidoreductase 860 1113 IPR036866 -
Lele30g1353 1113 MobiDBLite consensus disorder prediction 122 156 - -
Lele30g1353 1113 FunFam Hydroxyacylglutathione hydrolase, mitochondrial 860 1113 - -
Lele30g1353 1113 Gene3D - 860 1113 IPR036866 -
Lele30g1353 1113 MobiDBLite consensus disorder prediction 327 341 - -
Lele30g1353 1113 MobiDBLite consensus disorder prediction 310 326 - -
Lele30g1353 1113 Pfam Hydroxyacylglutathione hydrolase C-terminus 1029 1113 IPR032282 -
Lele30g1353 1113 SMART Lactamase_B_5a 870 1028 IPR001279 -
Lele30g1353 1113 MobiDBLite consensus disorder prediction 351 372 - -
Lele30g1353 1113 MobiDBLite consensus disorder prediction 283 309 - -
Lele30g1353 1113 CDD hydroxyacylglutathione_hydrolase_MBL-fold 865 1028 IPR035680 -
Lele30g1353 1113 PANTHER EXPRESSED PROTEIN 1 710 IPR010341 -
Lele30g1353 1113 MobiDBLite consensus disorder prediction 571 608 - -
Lele30g1353 1113 MobiDBLite consensus disorder prediction 123 137 - -
Lele30g1353 1113 TIGRFAM GSH_gloB: hydroxyacylglutathione hydrolase 863 1113 IPR017782 GO:0004416|GO:0019243
Lele30g1353 1113 MobiDBLite consensus disorder prediction 138 156 - -
Lele30g1353 1113 MobiDBLite consensus disorder prediction 571 596 - -
Lele30g1353 1113 Pfam Metallo-beta-lactamase superfamily 872 1028 IPR001279 -
Lele30g1353 1113 MobiDBLite consensus disorder prediction 283 372 - -
Lele30g1353 1113 Hamap Hydroxyacylglutathione hydrolase [gloB]. 860 1113 IPR017782 GO:0004416|GO:0019243
Lele30g1353 1113 Pfam Plant protein of unknown function (DUF936) 4 709 IPR010341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1353 Lele-ChrLele30 15744197 15755796 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g1353 30 15744197 15755796 Lele31g1507 31 20304921 20310984 hybridization
Lele30g1353 30 15744197 15755796 Lele32g0037 32 252272 256403 hybridization