Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1201 ATGAGGACAAGCAACCACTTGATTGGTTTAGTAAACTTCTTGACTTTTTTGCTCTCGATCCCAATCTTAGGAGGCGGAATATGGCTGAGCAGCAGAGCCAACAACACCGACTGCCTCAAGTTCCTGCAGTGGCCGTTGATCGTGATCGGAGTCTGCATAATGGTGGTGTCCCTGGCGGGATTCGCCGGCGCGTGCTACCGTAACACGTTCCTGATGTGGCTGTACCTGGTGGTGATGTTCTTCGTGATAGCAGCGCTGATAGGGTTCATAATATTCGCGTACGTGGTGACGGACAAGGGTTCGGGTCGGATGGTGATGAACCGGGCGTACTTGGAGTATCATCTGGAGGACTACTCGCCCACTTGGCTGGAGGAGAGAGTGGCGAGTGATAGTTACTGGGGGAAGATAAGCTCTTGTATTAGGGACTCCAAGGTGTGCGCTAAGATGGGCAGAACCGTTGGCGGTGTTCCTGAATCTGCCGATATGTTCTACCTCCGACGCCTGTCTCCGATTCAGTCTGGATGCTGCAAGCCCCCAACAGAGTGCGGATATGTGTACCAAAACGAAACATATTGGGACCAAGGAGAAGGACTGGTGGGGCCCAACCCAGATTGCACCAGGTGGAGCAACGACCAAGAGCAACTATGCTATGCTTGTGATTCTTGTAAAGCTGGTGTGCTTGCGAGAATAAAGAAGAGCTGGAGAAAAGTGTCAGTGATCAACATTGTAGTTATGATCATCCTTGTTATCTTCTATATAATTGCTTATGCTGCTTTTAGGAACAACCGCAAGATCGATAACGAGGAACCCTCTGGTCAAGCGAGAATGACTAAGGCACAACCCAGCAGAATCAGTTTTTAG 861 0.5006 MRTSNHLIGLVNFLTFLLSIPILGGGIWLSSRANNTDCLKFLQWPLIVIGVCIMVVSLAGFAGACYRNTFLMWLYLVVMFFVIAALIGFIIFAYVVTDKGSGRMVMNRAYLEYHLEDYSPTWLEERVASDSYWGKISSCIRDSKVCAKMGRTVGGVPESADMFYLRRLSPIQSGCCKPPTECGYVYQNETYWDQGEGLVGPNPDCTRWSNDQEQLCYACDSCKAGVLARIKKSWRKVSVINIVVMIILVIFYIIAYAAFRNNRKIDNEEPSGQARMTKAQPSRISF 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1201 286 PRINTS Transmembrane four family signature 6 29 - -
Lele30g1201 286 PRINTS Transmembrane four family signature 39 65 - -
Lele30g1201 286 PRINTS Transmembrane four family signature 66 94 - -
Lele30g1201 286 Pfam Tetraspanin family 6 255 IPR018499 GO:0016020
Lele30g1201 286 PANTHER TETRASPANIN-8-RELATED 1 264 IPR044991 GO:0009734|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1201 Lele-ChrLele30 14782242 14785527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g1201 1 278 Miscellaneous Gene Families AT5G60220 71.223 1.24e-129 369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g1201 30 14782242 14785527 Lele31g1343 31 19367709 19370860 hybridization
Lele30g1201 30 14782242 14785527 Lele32g0195 32 1178092 1181154 hybridization