Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1198 ATGAGCTCGGCAGAAGGCAATACGGGGGAGTCGGTGAGGTGGAAGGAATGCATCACGGAGTTCATGAGAGGTGCATCGGAGATGGCCGTGGAGTGTGGGAAAGGTTGTAGGGATATCATGAAGCAGAGCTTGATGGACGAGGATTCGTATATAGCGAGAAAATTTGGAAGGGATTCGTATTTTGCCAAGAGCGTAAGAGGACCCTGTGAAAAGTTATGCGGGAAATTGAGTTTCTTCAACGAGTACTTGCCGGAGGATAAGGATCCGCTGCACGCATGGTCGGTGATATTCTTTGTTTCGTTGATCGCCTTTGCAGCATTATATGTAAATTTTGAACATGATCCATCTGCTGATTCCATCCCATTGACGAAGCAAATATTTGTACATCCTCCTAGCGCTAGCCGAATAGTGCTTCCAGATGGTAGATACATGGCATACAAGGAACGAGGTGTTCCACCTGATAGAGCTAGATTTTCAATTATTGCTCCTCACACTTTTCTTTCCTCCCGGCTTGCAGGAATGCCCGGAGTTAAGCATTCTCTGCTTGAAGAGTTTGGCATTCACTTGTTGACCTATGATCTTCCTGGTTTTGGTGAGAGTGATCCTCACCCCAACAGAAACCTGGAATCCTCGGCAAGAGATATGTCTTTTCTAGCAGATGCTCTGGGTGTTAAGAAGTTCTGGGTTGTTGGTTACTCAAGTGGAAGCATGCATGCTTGGGCTGCACTAAGATACATTCCTGATAAACTTGCAGGTGCAGTGATGTTTTCCCCCATGATGAACCCATATGATCCCATCATGACAAAGGAAGAGAGGCGCAAAACTTGGGGGAAATGGAACAGGAAAAGAAAATTCATGTACATTTTAGCTCGGAGGTTTCCTAGACTTCTTGCTTTCTTCTATCAGCGAAGCTTTCTATCAGGAAAGCATGGCCAGATTGACAAGTGGTTGTCGTTATCTCTTGGAGAGAGGGATAAAGCACTAATGGAAGATCCAATCTATGAGGAATTCTGGCAAAGGGATGTGGAAGAGTCAATCAGGCAAGGAAATGTGAAACCCTTTGTTGAGGAATCTGCTTTTCAGGTCTCGAATTGGGGTTTCAGCCTCTCAGACCTCAAGTTGCAGAAGAAAAAACGGAGGCAAAATGTGCTCACTTGGCTCAAGTCAATATTCATAGCTGAACAAGAGGAGCAAATGGGTTTTCTTGGCCCAATACATATATGGCAGGGAATGGAGGATAAAGTGGTTCCTCCATCGATGACTGATTTTGTGCACCGCATCCTCCCGGGAGCTGCAGTACATAAACTCCCATATGAAGGTCACTTCACCTATATCTACTTTTGTGATGAGTGCCACAGGCAGATATTTACTACGCTTTTTGGAACCCCGCAAGGACCCCTCACCATTTCACTTGAACCAGATCAAACTATTTCACGTGTCAATATTGAACAGTCAGAAGAAGTAGCAGAAGACGCCGGTGACTCTACCACAGATGAAAAGCACACGTAA 1509 0.4533 MSSAEGNTGESVRWKECITEFMRGASEMAVECGKGCRDIMKQSLMDEDSYIARKFGRDSYFAKSVRGPCEKLCGKLSFFNEYLPEDKDPLHAWSVIFFVSLIAFAALYVNFEHDPSADSIPLTKQIFVHPPSASRIVLPDGRYMAYKERGVPPDRARFSIIAPHTFLSSRLAGMPGVKHSLLEEFGIHLLTYDLPGFGESDPHPNRNLESSARDMSFLADALGVKKFWVVGYSSGSMHAWAALRYIPDKLAGAVMFSPMMNPYDPIMTKEERRKTWGKWNRKRKFMYILARRFPRLLAFFYQRSFLSGKHGQIDKWLSLSLGERDKALMEDPIYEEFWQRDVEESIRQGNVKPFVEESAFQVSNWGFSLSDLKLQKKKRRQNVLTWLKSIFIAEQEEQMGFLGPIHIWQGMEDKVVPPSMTDFVHRILPGAAVHKLPYEGHFTYIYFCDECHRQIFTTLFGTPQGPLTISLEPDQTISRVNIEQSEEVAEDAGDSTTDEKHT 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1198 502 MobiDBLite consensus disorder prediction 483 502 - -
Lele30g1198 502 PANTHER HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN, EXPRESSED-RELATED 101 461 - -
Lele30g1198 502 Pfam alpha/beta hydrolase fold 181 445 IPR000073 -
Lele30g1198 502 Gene3D alpha/beta hydrolase 127 448 IPR029058 -
Lele30g1198 502 SUPERFAMILY alpha/beta-Hydrolases 130 456 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1198 Lele-ChrLele30 14762487 14765920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g1198 178 265 Acyl Lipid Metabolism Gene Families AT4G02340 31.183 1.89e-06 48.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g1198 30 14762487 14765920 Lele31g1341 31 19349814 19353328 hybridization
Lele30g1198 30 14762487 14765920 Lele32g0197 32 1196502 1199918 hybridization