Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1034 ATGGAGGTTCATCGGTCTCTGATCACTCTTTTTGTCTTTGCATTATCTCAAGCTTCTAAATCCCAAGTACTCAAGGCCAAAGTCTCCTGCTTTGACTGCACCAATGATATTCCCAACCAATATCTCTCTGAGATGAAGGTTTCAGTAAAGTGCGAGAATGTGAGAAAAGTGGCGGTGGCAACCACAGAAGAAGACGGCTCCTTCAAGGTGGATCTTCCAATAAGAGACCCCAAAAACCCTACGGTTTCTGATGTGAAGTGTGTCGCTAAACTGCTTGGAGGACCGAATCAGTTGACGAATGAGGTGAAGCTGACTTCATTAAAGATAAAGAAAAGACGAAAAATGGCAAAAAAGAAAGCATTCATTCCCCTTCTATATCTTACATCTATAGTCTTTTTGCCCTGGTGGATCTCTTTCTCATTTAAGAAAAATATGGAATCTTGGGTTACTAATTGGTCAAATACTAGACAATCCGAAATTTTCTTGAATGATATTCAAGAAAAGAGTATTCTCAAAAAATTCATAGAATTAGAGGAACTGTTACTCTTGGATGAAATGATAAAGGAATACCCGGAAACACGTCTACAAAACCTTCGTATCCGAATCTACAAAGAAACGATCCAATTGATCAAGACGCACAACGAAGATCGTATGAATATGATTTTGCACTTCTCGACAAATATAATCTGTTTCGTTATTTTAAGTGGTTATTCTATTCTAGGTAATCAAGAACTTATTATTCTTAACTCTTGGGTTCAAGAATTCCTATATAACTTAAGCGACACAATAAAAGCTTTTTCTATTCTTTTATTAACGGATTTATGTATAGGATTCCATTCAACCCATGGTTGGGAACTAATGATTGGTTCTGTCTATAAAGATTTTGGATTTGCTCATAATGATCAAATTATATCCGGTCTTGTTTCCACTTTTCCAGTCATTCTAGATACAATTTTGAAATATTGGATTTTCCGTTATTTAAATCGGGATTCCTCCTATATTCCAGTAAAATTCTTTCAGTACATAGCAGAATCATGGATAGGGAACTGTACCAGTGACCAACCTAATTTTATTGTAGAACTTTTCAGGATCAATGATTGGACCATGCAAACTAGAAATTACTGTTCTTGGATAAAGGAAGAGATTACTCGATCAATTTCCGTATCGCTCATGATATATATAATAACTCGAGCACCCATTTCAAATGCATATCCCATTTTTGCACAGCAGGGTTATGAAAATCCGCGAGAAGCAACTGGCCGTATTGTATGTGCCAATTGCCATTTAGCTAATAAACCCGTGGATATCGAGGTTCCACAAGCGGTACTTCCTGATACTGTATTTGAAGCAGTTGTTCGAATTCCTTATGATATGCAAGTGAAACAAGTTCTTGCTAATGGTAAAAAGGGGGCTTTGAATGTGGGGGCTGTTCTTATTTTACCGGAGGGGTTTGAATTGGCTCCCCCCGATCGTATTTCGCCTGAGATTAAAGAAAAGATAGGTAATCTGTCTTTTCAAAACTATCGTCCCACTAAAAAAAATATTCTTGTGGTAGGCCCTGTTCCTGGTCAGAAATATAATGAAATCACCTTTCCTATTCTTTCCCCCGATCCCGCTACTAAGAGAGATGTTCACTTCTTAAAATATCCAATATACGTAGGCGGGAACAGGGGAAGGGGGCAGATTTATCCCGACGGGAGCAAGAGTAATAATAATGTTTATAATGCTACAGCAACAGAACTTCTTGTTTCAGAGGGTGAATCTATCAAACTTGATCAACCATTAACGAGTAATCCCAATGTGGGTGGATTTGGTCAGGGGGATGCGGAAATAGTACTTCAAGATCCGTTACGTGTCCAAGGTCTCTTGTTCTTCGTGGCATCTGTTATTTTGGCACAAATCTTTTTGGTTCTTAAAAAGAAACAGTTTGAGAAGGTTCAATTATCTGAAATGAATTTCTAG 1962 0.3782 MEVHRSLITLFVFALSQASKSQVLKAKVSCFDCTNDIPNQYLSEMKVSVKCENVRKVAVATTEEDGSFKVDLPIRDPKNPTVSDVKCVAKLLGGPNQLTNEVKLTSLKIKKRRKMAKKKAFIPLLYLTSIVFLPWWISFSFKKNMESWVTNWSNTRQSEIFLNDIQEKSILKKFIELEELLLLDEMIKEYPETRLQNLRIRIYKETIQLIKTHNEDRMNMILHFSTNIICFVILSGYSILGNQELIILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSTHGWELMIGSVYKDFGFAHNDQIISGLVSTFPVILDTILKYWIFRYLNRDSSYIPVKFFQYIAESWIGNCTSDQPNFIVELFRINDWTMQTRNYCSWIKEEITRSISVSLMIYIITRAPISNAYPIFAQQGYENPREATGRIVCANCHLANKPVDIEVPQAVLPDTVFEAVVRIPYDMQVKQVLANGKKGALNVGAVLILPEGFELAPPDRISPEIKEKIGNLSFQNYRPTKKNILVVGPVPGQKYNEITFPILSPDPATKRDVHFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATATELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLLFFVASVILAQIFLVLKKKQFEKVQLSEMNF 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1034 653 PANTHER - 391 617 - -
Lele30g1034 653 Gene3D Cytochrome f large domain 404 619 IPR036826 -
Lele30g1034 653 SUPERFAMILY Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor 615 653 IPR024058 -
Lele30g1034 653 ProSiteProfiles Cytochrome f family profile. 403 653 IPR002325 GO:0005506|GO:0009055|GO:0015979|GO:0020037|GO:0042651
Lele30g1034 653 Pfam Pollen protein Ole e 1 like 27 97 - -
Lele30g1034 653 SUPERFAMILY Cytochrome f, large domain 404 618 IPR036826 -
Lele30g1034 653 PRINTS Cytochrome F signature 494 514 IPR002325 GO:0005506|GO:0009055|GO:0015979|GO:0020037|GO:0042651
Lele30g1034 653 PRINTS Cytochrome F signature 412 431 IPR002325 GO:0005506|GO:0009055|GO:0015979|GO:0020037|GO:0042651
Lele30g1034 653 PRINTS Cytochrome F signature 453 472 IPR002325 GO:0005506|GO:0009055|GO:0015979|GO:0020037|GO:0042651
Lele30g1034 653 PRINTS Cytochrome F signature 515 535 IPR002325 GO:0005506|GO:0009055|GO:0015979|GO:0020037|GO:0042651
Lele30g1034 653 PRINTS Cytochrome F signature 536 556 IPR002325 GO:0005506|GO:0009055|GO:0015979|GO:0020037|GO:0042651
Lele30g1034 653 PRINTS Cytochrome F signature 557 580 IPR002325 GO:0005506|GO:0009055|GO:0015979|GO:0020037|GO:0042651
Lele30g1034 653 PRINTS Cytochrome F signature 399 410 IPR002325 GO:0005506|GO:0009055|GO:0015979|GO:0020037|GO:0042651
Lele30g1034 653 PRINTS Cytochrome F signature 432 452 IPR002325 GO:0005506|GO:0009055|GO:0015979|GO:0020037|GO:0042651
Lele30g1034 653 PRINTS Cytochrome F signature 473 493 IPR002325 GO:0005506|GO:0009055|GO:0015979|GO:0020037|GO:0042651
Lele30g1034 653 Pfam Apocytochrome F, C-terminal 576 653 IPR002325 GO:0005506|GO:0009055|GO:0015979|GO:0020037|GO:0042651
Lele30g1034 653 Hamap envelope membrane protein, chloroplastic [cemA]. 115 343 IPR004282 GO:0016020
Lele30g1034 653 FunFam Cytochrome f 404 595 - -
Lele30g1034 653 Pfam CemA family 117 331 IPR004282 GO:0016020
Lele30g1034 653 FunFam Cytochrome f 620 653 - -
Lele30g1034 653 Gene3D Single helix bin 620 653 - -
Lele30g1034 653 Hamap Cytochrome f [petA]. 382 652 IPR002325 GO:0005506|GO:0009055|GO:0015979|GO:0020037|GO:0042651
Lele30g1034 653 Pfam Apocytochrome F, N-terminal 404 558 IPR024094 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1034 Lele-ChrLele30 13702413 13706689 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g1034 30 13702413 13706689 Lele31g1169 31 18210923 18211601 hybridization
Lele30g1034 30 13702413 13706689 Lele32g0357 32 2228706 2229342 hybridization